Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.000030 2
Target name Tax id
DNA (cytosine-5)-methyltransferase 3B 9606.0
DNA (cytosine-5)-methyltransferase 1 9606.0
418.863
Chemical Representations
InChI InChI=1S/C14H19ClN6O5S/c15-14-19-10(17)7-11(20-14)21(4-18-7)12-9(23)8(22)6(26-12)3-27-2-1-5(16)13(24)25/h4-6,8-9,12,22-23H,1-3,16H2,(H,24,25)(H2,17,19,20)/t5?,6-,8-,9-,12-/m1/s1
InChI Key HGUVDAILKKOLIO-NRJACJQQSA-N
SMILES Nc1nc(Cl)nc2c1ncn2[C@@H]1O[C@H](CSCCC(N)C(=O)O)[C@@H](O)[C@H]1O
Molecular Formula C14H19ClN6O5S
Functional Fragments
Base Ribose Phosphate
Base Structure
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Calculated Properties
logP -0.784 Computed by RDKit
Heavy Atom Count 27 Computed by RDKit
Ring Count 3 Computed by RDKit
Hydrogen Bond Acceptor Count 11 Computed by RDKit
Hydrogen Bond Donor Count 5 Computed by RDKit
Rotatable Bond Count 7 Computed by RDKit
Topological Polar Surface Area 182.630 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
DNA (cytosine-5)-methyltransferase 1 IC50 = 2900.0 nM Inhibition of human recombinant DNMT1 expressed in baculovirus infected high five insect cells CHEMBL1151871
DNA (cytosine-5)-methyltransferase 3B IC50 = 57200.0 nM Inhibition of human recombinant DNMT3b2 expressed in baculovirus infected high five insect cells CHEMBL1151871
DNA (cytosine-5)-methyltransferase 3B Ratio IC50 = 190.0 Ratio of SAH IC50 to compound IC50 for human recombinant DNMT3b2 CHEMBL1151871