Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.000135 2
Target name Tax id
DNA (cytosine-5)-methyltransferase 3B 9606.0
DNA (cytosine-5)-methyltransferase 1 9606.0
576.679
Chemical Representations
InChI InChI=1S/C29H32N6O5S/c36-24-22(14-41-20-12-21(29(38)39)31-13-20)40-28(25(24)37)35-16-34-23-26(32-15-33-27(23)35)30-11-10-17-6-8-19(9-7-17)18-4-2-1-3-5-18/h1-9,15-16,20-22,24-25,28,31,36-37H,10-14H2,(H,38,39)(H,30,32,33)/t20-,21-,22+,24+,25+,28+/m0/s1
InChI Key IEFYFVPAOMYINX-OGFANMSHSA-N
SMILES O=C(O)[C@@H]1C[C@H](SC[C@H]2O[C@@H](n3cnc4c(NCCc5ccc(-c6ccccc6)cc5)ncnc43)[C@H](O)[C@@H]2O)CN1
Molecular Formula C29H32N6O5S
Functional Fragments
Base Ribose Phosphate
Base Structure
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Calculated Properties
logP 2.315 Computed by RDKit
Heavy Atom Count 41 Computed by RDKit
Ring Count 6 Computed by RDKit
Hydrogen Bond Acceptor Count 11 Computed by RDKit
Hydrogen Bond Donor Count 5 Computed by RDKit
Rotatable Bond Count 10 Computed by RDKit
Topological Polar Surface Area 154.650 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
DNA (cytosine-5)-methyltransferase 1 IC50 = 3700.0 nM Inhibition of human recombinant DNMT1 CHEMBL1151876
DNA (cytosine-5)-methyltransferase 3B IC50 = 260.0 nM Inhibition of human recombinant DNMT3b2 CHEMBL1151876