Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.000770 2
Target name Tax id
DNA (cytosine-5)-methyltransferase 3B 9606.0
DNA (cytosine-5)-methyltransferase 1 9606.0
611.124
Chemical Representations
InChI InChI=1S/C29H31ClN6O5S/c30-29-34-25(31-11-10-16-6-8-18(9-7-16)17-4-2-1-3-5-17)22-26(35-29)36(15-33-22)27-24(38)23(37)21(41-27)14-42-19-12-20(28(39)40)32-13-19/h1-9,15,19-21,23-24,27,32,37-38H,10-14H2,(H,39,40)(H,31,34,35)/t19-,20-,21+,23+,24+,27+/m0/s1
InChI Key JUNARBZTVSAGMF-ODXIBGGOSA-N
SMILES O=C(O)[C@@H]1C[C@H](SC[C@H]2O[C@@H](n3cnc4c(NCCc5ccc(-c6ccccc6)cc5)nc(Cl)nc43)[C@H](O)[C@@H]2O)CN1
Molecular Formula C29H31ClN6O5S
Functional Fragments
Base Ribose Phosphate
Base Structure
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Calculated Properties
logP 2.969 Computed by RDKit
Heavy Atom Count 42 Computed by RDKit
Ring Count 6 Computed by RDKit
Hydrogen Bond Acceptor Count 11 Computed by RDKit
Hydrogen Bond Donor Count 5 Computed by RDKit
Rotatable Bond Count 10 Computed by RDKit
Topological Polar Surface Area 154.650 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
DNA (cytosine-5)-methyltransferase 1 IC50 = 2500.0 nM Inhibition of human recombinant DNMT1 CHEMBL1151876
DNA (cytosine-5)-methyltransferase 3B IC50 = 920.0 nM Inhibition of human recombinant DNMT3b2 CHEMBL1151876