Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.000831 2
Target name Tax id
DNA (cytosine-5)-methyltransferase 3B 9606.0
DNA (cytosine-5)-methyltransferase 1 9606.0
396.429
Chemical Representations
InChI InChI=1S/C15H20N6O5S/c16-12-9-13(19-4-18-12)21(5-20-9)14-11(23)10(22)8(26-14)3-27-6-1-7(15(24)25)17-2-6/h4-8,10-11,14,17,22-23H,1-3H2,(H,24,25)(H2,16,18,19)/t6-,7-,8+,10+,11+,14+/m0/s1
InChI Key MEKRNVYIIASAEQ-YECHIGJVSA-N
SMILES Nc1ncnc2c1ncn2[C@@H]1O[C@H](CS[C@@H]2CN[C@H](C(=O)O)C2)[C@@H](O)[C@H]1O
Molecular Formula C15H20N6O5S
Functional Fragments
Base Ribose Phosphate
Base Structure
Match
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Calculated Properties
logP -1.424 Computed by RDKit
Heavy Atom Count 27 Computed by RDKit
Ring Count 4 Computed by RDKit
Hydrogen Bond Acceptor Count 11 Computed by RDKit
Hydrogen Bond Donor Count 5 Computed by RDKit
Rotatable Bond Count 5 Computed by RDKit
Topological Polar Surface Area 168.640 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
DNA (cytosine-5)-methyltransferase 1 IC50 = 1100.0 nM Inhibition of human recombinant DNMT1 CHEMBL1151876
DNA (cytosine-5)-methyltransferase 3B IC50 = 300.0 nM Inhibition of human recombinant DNMT3b2 CHEMBL1151876