Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.002060 2
Target name Tax id
DNA (cytosine-5)-methyltransferase 3B 9606.0
DNA (cytosine-5)-methyltransferase 1 9606.0
460.516
Chemical Representations
InChI InChI=1S/C20H24N6O5S/c21-12(20(29)30)6-7-32-8-13-15(27)16(28)19(31-13)26-10-24-14-17(22-9-23-18(14)26)25-11-4-2-1-3-5-11/h1-5,9-10,12-13,15-16,19,27-28H,6-8,21H2,(H,29,30)(H,22,23,25)/t12?,13-,15-,16-,19-/m1/s1
InChI Key YMMPYUOHWIGNHQ-XTMLTMLVSA-N
SMILES NC(CCSC[C@H]1O[C@@H](n2cnc3c(Nc4ccccc4)ncnc32)[C@H](O)[C@@H]1O)C(=O)O
Molecular Formula C20H24N6O5S
Functional Fragments
Base Ribose Phosphate
Base Structure
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Calculated Properties
logP 0.724 Computed by RDKit
Heavy Atom Count 32 Computed by RDKit
Ring Count 4 Computed by RDKit
Hydrogen Bond Acceptor Count 11 Computed by RDKit
Hydrogen Bond Donor Count 5 Computed by RDKit
Rotatable Bond Count 9 Computed by RDKit
Topological Polar Surface Area 168.640 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
DNA (cytosine-5)-methyltransferase 1 IC50 = 154000.0 nM Inhibition of human recombinant DNMT1 expressed in baculovirus infected high five insect cells CHEMBL1151871
DNA (cytosine-5)-methyltransferase 3B IC50 = 2000.0 nM Inhibition of human recombinant DNMT3b2 expressed in baculovirus infected high five insect cells CHEMBL1151871