Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.002563 2
Target name Tax id
DNA (cytosine-5)-methyltransferase 3B 9606.0
DNA (cytosine-5)-methyltransferase 1 9606.0
410.456
Chemical Representations
InChI InChI=1S/C16H22N6O5S/c17-13-10-14(20-5-19-13)22(6-21-10)15-12(24)11(23)9(27-15)4-28-7-1-2-18-8(3-7)16(25)26/h5-9,11-12,15,18,23-24H,1-4H2,(H,25,26)(H2,17,19,20)/t7-,8-,9+,11+,12+,15+/m0/s1
InChI Key PPAKVYRRHNXOLG-TVDBPQCTSA-N
SMILES Nc1ncnc2c1ncn2[C@@H]1O[C@H](CS[C@H]2CCN[C@H](C(=O)O)C2)[C@@H](O)[C@H]1O
Molecular Formula C16H22N6O5S
Functional Fragments
Base Ribose Phosphate
Base Structure
Match
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Calculated Properties
logP -1.034 Computed by RDKit
Heavy Atom Count 28 Computed by RDKit
Ring Count 4 Computed by RDKit
Hydrogen Bond Acceptor Count 11 Computed by RDKit
Hydrogen Bond Donor Count 5 Computed by RDKit
Rotatable Bond Count 5 Computed by RDKit
Topological Polar Surface Area 168.640 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
DNA (cytosine-5)-methyltransferase 1 IC50 = 8000.0 nM Inhibition of human recombinant DNMT1 CHEMBL1151876
DNA (cytosine-5)-methyltransferase 3B IC50 = 1500.0 nM Inhibition of human recombinant DNMT3b2 CHEMBL1151876