Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.002702 2
Target name Tax id
DNA (cytosine-5)-methyltransferase 3B 9606.0
DNA (cytosine-5)-methyltransferase 1 9606.0
366.447
Chemical Representations
InChI InChI=1S/C15H22N6O3S/c1-20-3-2-8(4-20)25-5-9-11(22)12(23)15(24-9)21-7-19-10-13(16)17-6-18-14(10)21/h6-9,11-12,15,22-23H,2-5H2,1H3,(H2,16,17,18)/t8-,9-,11-,12-,15-/m1/s1
InChI Key GNEGVTFJIGGNMX-NENBDWHOSA-N
SMILES CN1CC[C@@H](SC[C@H]2O[C@@H](n3cnc4c(N)ncnc43)[C@H](O)[C@@H]2O)C1
Molecular Formula C15H22N6O3S
Functional Fragments
Base Ribose Phosphate
Base Structure
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Calculated Properties
logP -0.535 Computed by RDKit
Heavy Atom Count 25 Computed by RDKit
Ring Count 4 Computed by RDKit
Hydrogen Bond Acceptor Count 10 Computed by RDKit
Hydrogen Bond Donor Count 3 Computed by RDKit
Rotatable Bond Count 4 Computed by RDKit
Topological Polar Surface Area 122.550 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
DNA (cytosine-5)-methyltransferase 1 IC50 > 10000.0 nM Inhibition of human recombinant DNMT1 CHEMBL1151876
DNA (cytosine-5)-methyltransferase 3B Inhibition = 32.0 % Inhibition of human recombinant DNMT3b2 at 45 uM CHEMBL1151876