Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.002818 2 ADEMETIONINE
Target name Tax id
Phenylethanolamine N-methyltransferase
Met repressor
Protein-arginine N-methyltransferase 1
S-adenosylmethionine decarboxylase 1
Protein-beta-aspartate methyltransferase
4'-phosphopantetheinyl transferase ffp
Histone-lysine N-methyltransferase
H3 lysine-9 specific 3
Peripheral myelin protein 22
Catechol O-methyltransferase
5-methylthioadenosine/S-adenosylhomocysteine deaminase
Histone H3K27 methylase
398.445
Chemical Representations
InChI InChI=1S/C15H22N6O5S/c1-27(3-2-7(16)15(24)25)4-8-10(22)11(23)14(26-8)21-6-20-9-12(17)18-5-19-13(9)21/h5-8,10-11,14,22-23H,2-4,16H2,1H3,(H2-,17,18,19,24,25)/t7-,8+,10+,11+,14+,27?/m0/s1
InChI Key MEFKEPWMEQBLKI-AIRLBKTGSA-N
SMILES C[S+](CC[C@H](N)C(=O)[O-])C[C@H]1O[C@@H](n2cnc3c(N)ncnc32)[C@H](O)[C@@H]1O
Molecular Formula C15H22N6O5S
Functional Fragments
Base Ribose Phosphate
Base Structure
Match
No Image Available
Match
Calculated Properties
logP -3.257 Computed by RDKit
Heavy Atom Count 27 Computed by RDKit
Ring Count 3 Computed by RDKit
Hydrogen Bond Acceptor Count 11 Computed by RDKit
Hydrogen Bond Donor Count 4 Computed by RDKit
Rotatable Bond Count 7 Computed by RDKit
Topological Polar Surface Area 185.460 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
S-adenosylmethionine decarboxylase 1 Ki = 300000.0 nM In vitro inhibitory activity against S-adenosyl-L-methionine decarboxylase using liver from rat in absence of putrescine CHEMBL1122056
S-adenosylmethionine decarboxylase 1 Ki = 60000.0 nM In vitro inhibitory activity against S-adenosyl-L-methionine decarboxylase using liver from rat in presence of 1 mM putrescine CHEMBL1122056
S-adenosylmethionine decarboxylase 1 Inactivation time = 100.0 min Time required for the half inactivation of S-Adenosyl-L-methionine decarboxylase was determined with 0.2 mM of compound CHEMBL1122056
S-adenosylmethionine decarboxylase 1 Inactivation time = 25.0 min Time required for the half inactivation of S-Adenosyl-L-methionine decarboxylase was determined with 0.2 mM of compound along with 1 mM NaBH3CN CHEMBL1122056
S-adenosylmethionine decarboxylase 1 Inactivation time = 28.0 min Time required for the half inactivation of S-Adenosyl-L-methionine decarboxylase was determined with 1 mM of compound CHEMBL1122056
S-adenosylmethionine decarboxylase 1 Inactivation time = 77.0 min Time required for the half inactivation of S-adenosyl-L-methionine decarboxylase with 1 mM of compound along with 0.05 mM of [5-(6-Amino-purin-9-yl)-3,4-dihydroxy-tetrahydro-furan-2-ylmethyl]-dimethyl-sulfonium; iodide CHEMBL1122056
Catechol O-methyltransferase Km = 44600.0 nM In vitro inhibitory activity against Catechol-O-methyltransferase from porcine liver CHEMBL1130076
Leishmania donovani Km = 55000.0 nM Apparent kinetic activity measured for protein carboxyl methyltransferase in Leishmania donovani promastigotes CHEMBL1125204
S-adenosylmethionine decarboxylase 1 Activity = 69.0 % Tested for S-adenosyl-L-methionine decarboxylase activity recovered after 40 min of 0.2 nM compound in incubation media CHEMBL1121382
S-adenosylmethionine decarboxylase 1 Activity = 17.0 % Tested for S-adenosyl-L-methionine decarboxylase activity recovered after 40 min of 0.2 nM +1 mM NaBH3CN compound in incubation media CHEMBL1121382
S-adenosylmethionine decarboxylase 1 Activity = 43.0 % Tested for S-adenosyl-L-methionine decarboxylase activity recovered after 80 min of 0.2 nM compound in incubation media CHEMBL1121382
S-adenosylmethionine decarboxylase 1 Km = 51400.0 nM Km of compound for S-adenosyl-L-methionine decarboxylase CHEMBL1121382
S-adenosylmethionine decarboxylase 1 Vmax = 8.72 Tested for kinetic constant (Vmax) of compound for S-adenosyl-L-methionine decarboxylase CHEMBL1121382
Protein-beta-aspartate methyltransferase Ki = 48000.0 nM Kinetic constant was measured for PMII of Leishmania donovani promastigotes using supernatant (S12) fraction CHEMBL1126291
Protein-beta-aspartate methyltransferase Ki = 164000.0 nM Kinetic constant was measured for PMII of Leishmania donovani promastigotes using protein extracted from the 12000 g pellet (P12). CHEMBL1126291
Phenylethanolamine N-methyltransferase Kd = 4800.0 nM Activity of human wild type PNMT assessed as phenylethanolamine methylation CHEMBL1139475
Phenylethanolamine N-methyltransferase Kd = 7100.0 nM Activity of human PNMT V53A mutant assessed as phenylethanolamine methylation CHEMBL1139475
Phenylethanolamine N-methyltransferase Km = 9600.0 nM Activity of human PNMT V53A mutant assessed as phenylethanolamine methylation CHEMBL1139475
Phenylethanolamine N-methyltransferase Km = 1200.0 nM Activity of human wild type PNMT assessed as phenylethanolamine methylation CHEMBL1139475
Phenylethanolamine N-methyltransferase Kd = 10700.0 nM Activity of human PNMT K57A mutant assessed as phenylethanolamine methylation CHEMBL1139475
Phenylethanolamine N-methyltransferase Km = 11700.0 nM Activity of human PNMT K57A mutant assessed as phenylethanolamine methylation CHEMBL1139475
Phenylethanolamine N-methyltransferase Kd = 7500.0 nM Activity of human PNMT E219A mutant assessed as phenylethanolamine methylation CHEMBL1139475
Phenylethanolamine N-methyltransferase Km = 7100.0 nM Activity of human PNMT E219A mutant assessed as phenylethanolamine methylation CHEMBL1139475
Phenylethanolamine N-methyltransferase Kd = 11000.0 nM Activity of human PNMT D267A mutant assessed as phenylethanolamine methylation CHEMBL1139475
Phenylethanolamine N-methyltransferase Km = 2400.0 nM Activity of human PNMT D267A mutant assessed as phenylethanolamine methylation CHEMBL1139475
Phenylethanolamine N-methyltransferase Kd = 7500.0 nM Activity of human PNMT D267N mutant assessed as phenylethanolamine methylation CHEMBL1139475
Phenylethanolamine N-methyltransferase Km = 7100.0 nM Activity of human PNMT D267N mutant assessed as phenylethanolamine methylation CHEMBL1139475
5-methylthioadenosine/S-adenosylhomocysteine deaminase Km Activity of Thermotoga maritima S-adenosyl-homocysteine deaminase Tm0936 assessed as ammonia production CHEMBL1145524
5-methylthioadenosine/S-adenosylhomocysteine deaminase Kcat = 1.0 10^-3/s Activity of Thermotoga maritima S-adenosyl-homocysteine deaminase Tm0936 assessed as ammonia production CHEMBL1145524
5-methylthioadenosine/S-adenosylhomocysteine deaminase Kcat/Km Ratio of Kcat to Km for Thermotoga maritima S-adenosyl-homocysteine deaminase Tm0936 assessed as ammonia production CHEMBL1145524
Protein-arginine N-methyltransferase 1 IC50 = 12000.0 nM Inhibition of GST-fused human recombinant PRMT1 after 90 mins by SDS-PAGE based scintillation counting CHEMBL1156943
Unchecked Kcat = 0.9 /min Activity at Salinispora tropica CNB-440 wild type recombinant SalL expressed in Escherichia coli BL21(DE3) after 30 mins by HPLC analysis CHEMBL1212694
Unchecked Km = 1000.0 nM Activity at Salinispora tropica CNB-440 wild type recombinant SalL expressed in Escherichia coli BL21(DE3) after 30 mins by HPLC analysis CHEMBL1212694
Unchecked Kcat/Km = 900.0 /mM/min Ratio of Kcat to Km for Salinispora tropica CNB-440 wild type recombinant SalL expressed in Escherichia coli BL21(DE3) CHEMBL1212694
4'-phosphopantetheinyl transferase ffp Potency = 31622.8 nM PUBCHEM_BIOASSAY: qHTS Assay for Inhibitors of Bacillus subtilis Sfp phosphopantetheinyl transferase (PPTase). (Class of assay: confirmatory) CHEMBL1201862
Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 Potency 3162.3 nM PUBCHEM_BIOASSAY: qHTS Assay for Inhibitors of Histone Lysine Methyltransferase G9a. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID504404] CHEMBL1201862
Nucleic Acid Activity Binding affinity to 2-amino purine labelled SAM2 riboswitch aptamer assessed as change in fluorescence at 5 mM to 10 mM at pH 8.3 by fluorescence binding assay CHEMBL1817644
Nucleic Acid Kd = 6000.0 nM Binding affinity to 2-amino purine labelled SAM2 riboswitch aptamer assessed as change in fluorescence at 5 mM to 10 mM at pH 8.3 by fluorescence binding assay CHEMBL1817644
Unchecked Kcat = 3.9 /min Activity of wild type Paramecium bursaria Chlorella virus 1 vSET domain protein methyltransferase activity expressed in Escherichia coli BL21 (DE3) cells assessed as trimethylation at histone H3 lysine 27 residue measured after 30 mins by Michaelis-Menten equation analysis CHEMBL1932996
Histone H3K27 methylase Kcat = 0.00048 /min Activity of Paramecium bursaria Chlorella virus 1 vSET domain protein Y109G mutant methyltransferase activity expressed in Escherichia coli BL21 (DE3) cells assessed as trimethylation at histone H3 lysine 27 residue measured after 30 mins by Michaelis-Menten equation analysis CHEMBL1932996
Histone H3K27 methylase Kcat = 7.4 /min Activity of Paramecium bursaria Chlorella virus 1 vSET domain protein L116A mutant methyltransferase activity expressed in Escherichia coli BL21 (DE3) cells assessed as trimethylation at histone H3 lysine 27 residue measured after 30 mins by Michaelis-Menten equation analysis CHEMBL1932996
Unchecked Kcat/Km = 30952.0 /min/M Ratio of Kcat to Km for wild type Paramecium bursaria Chlorella virus 1 vSET methyltransferase activity expressed in Escherichia coli BL21 (DE3) cells assessed as trimethylation at histone H3 lysine 27 residue measured after 30 mins by Michaelis-Menten equation analysis CHEMBL1932996
Histone H3K27 methylase Kcat/Km = 7.7 /min/M Ratio of Kcat to Km for Paramecium bursaria Chlorella virus 1 vSET domain protein Y109G mutant methyltransferase activity expressed in Escherichia coli BL21 (DE3) cells assessed as trimethylation at histone H3 lysine 27 residue measured after 30 mins by Michaelis-Menten equation analysis CHEMBL1932996
Histone H3K27 methylase Kcat/Km = 123333.0 /min/M Ratio of Kcat to Km for Paramecium bursaria Chlorella virus 1 vSET domain protein L116A mutant methyltransferase activity expressed in Escherichia coli BL21 (DE3) cells assessed as trimethylation at histone H3 lysine 27 residue measured after 30 mins by Michaelis-Menten equation analysis CHEMBL1932996
Unchecked Km = 126000.0 nM Activity of wild type Paramecium bursaria Chlorella virus 1 vSET domain protein methyltransferase activity expressed in Escherichia coli BL21 (DE3) cells assessed as trimethylation at histone H3 lysine 27 residue measured after 30 mins by Michaelis-Menten equation analysis CHEMBL1932996
Histone H3K27 methylase Km = 62000.0 nM Activity of Paramecium bursaria Chlorella virus 1 vSET domain protein Y109G mutant methyltransferase activity expressed in Escherichia coli BL21 (DE3) cells assessed as trimethylation at histone H3 lysine 27 residue measured after 30 mins by Michaelis-Menten equation analysis CHEMBL1932996
Histone H3K27 methylase Km = 60000.0 nM Activity of Paramecium bursaria Chlorella virus 1 vSET domain protein L116A mutant methyltransferase activity expressed in Escherichia coli BL21 (DE3) cells assessed as trimethylation at histone H3 lysine 27 residue measured after 30 mins by Michaelis-Menten equation analysis CHEMBL1932996
Met repressor Kd = 4.0 nM Binding affinity to Escherichia coli metJ in presence of operator DNA complex by filter binding study CHEMBL1938273
Met repressor EC50 = 17.3 nM Binding affinity to Escherichia coli metJ assessed as protein dimer-DNA complex formation using F-metC operator DNA by fluorescence anisotropy CHEMBL1938273
Peripheral myelin protein 22 Potency 12.8 nM PUBCHEM_BIOASSAY: S16 Schwann cell PMP22 intronic element firefly luciferase assay. (Class of assay: confirmatory) CHEMBL1201862
NON-PROTEIN TARGET Hepatotoxicity (moderate) = 2.0 Moderate liver toxicity, defined via clinical-chemistry results: ALT or AST serum activity 6 times the normal upper limit (N) or alkaline phosphatase serum activity of 1.7 N. Value is number of references indexed. [column 'BIOL' in source] CHEMBL3137667
NON-PROTEIN TARGET Hepatotoxicity (moderate) = 5.0 % Highest frequency of moderate liver toxicity observed during clinical trials, expressed as a percentage. [column '% BIOL' in source] CHEMBL3137667
Unchecked Hepatotoxicity (acute) = 1.0 Acute liver toxicity defined via clinical observations and clear clinical-chemistry results: serum ALT or AST activity > 6 N or serum alkaline phosphatases activity > 1.7 N. This category includes cytolytic, choleostatic and mixed liver toxicity. Value is number of references indexed. [column 'AIGUE' in source] CHEMBL3137667
NON-PROTEIN TARGET Hepatotoxicity (acute) = 0.0 % Highest frequency of acute liver toxicity observed during clinical trials, expressed as a percentage. [column '% AIGUE' in source] CHEMBL3137667
Unchecked Hepatotoxicity (cytolytic) = 1.0 Cytolytic liver toxicity, either proven histopathologically or where the ratio of maximal ALT or AST activity above normal to that of Alkaline Phosphatase is > 5 (see ACUTE). Value is number of references indexed. [column 'CYTOL' in source] CHEMBL3137667
Unchecked Hepatotoxicity (choleostasis) = 0.0 Choleostatic liver toxicity, either proven histopathologically or where the ratio of maximal ALT or AST activity above normal to that of Alkaline Phosphatase is < 2 (see ACUTE). Value is number of references indexed. [column 'CHOLE' in source] CHEMBL3137667
Unchecked Hepatotoxicity (severe hepatitis) = 0.0 Severe hepatitis, defined as possibly life-threatening liver failure or through clinical observations. Value is number of references indexed. [column 'MASS' in source] CHEMBL3137667
Unchecked Hepatotoxicity (chronic liver disease) = 0.0 Chronic liver disease either proven histopathologically, or through a chonic elevation of serum amino-transferase activity after 6 months. Value is number of references indexed. [column 'CHRON' in source] CHEMBL3137667
Unchecked Hepatotoxicity (cirrhosis) = 0.0 Cirrhosis, proven histopathologically. Value is number of references indexed. [column 'CIRRH' in source] CHEMBL3137667
NON-PROTEIN TARGET Hepatotoxicity (granulomatous hepatitis) = 0.0 Granulomatous liver disease, proven histopathologically. Value is number of references indexed. [column 'GRAN' in source] CHEMBL3137667
Unchecked Hepatotoxicity (association with vascular disease) = 0.0 Liver damage due to vascular disease: peliosis hepatitis, hepatic veno-occlusive disease, Budd-Chiari syndrome. Value is number of references indexed. [column 'VASC' in source] CHEMBL3137667
Unchecked Hepatotoxicity (steatosis) = 0.0 Steatosis, proven histopathologically. Value is number of references indexed. [column 'STEAT' in source] CHEMBL3137667
Unchecked Hepatotoxicity (malignant tumour) = 0.0 Malignant tumor, proven histopathologically. Value is number of references indexed. [column 'T.MAL' in source] CHEMBL3137667
NON-PROTEIN TARGET Hepatotoxicity (benign tumour) = 0.0 Benign tumor, proven histopathologically. Value is number of references indexed. [column 'T.BEN' in source] CHEMBL3137667
NON-PROTEIN TARGET Hepatotoxicity (animal toxicity known) Animal toxicity known. [column 'TOXIC' in source] CHEMBL3137667
Unchecked Hepatotoxicity (successful reintroduction) Presence of at least one case with successful reintroduction. [column 'REINT' in source] CHEMBL3137667
Unchecked Hepatotoxicity (comment) Comments (NB not yet translated). [column 'COMMENTAIRES' in source] CHEMBL3137667
NON-PROTEIN TARGET Hepatotoxicity (time to onset) Times to onset, minimal and maximal, observed in the indexed observations. [column 'DELAI' in source] CHEMBL3137667
NON-PROTEIN TARGET Hepatotoxicity (mechanism) Proposed mechanism(s) of liver damage. [column 'MEC' in source] CHEMBL3137667
No relevant target Rf = 0.34 Retardation factor, Rf of the compound on silica gel GF containing 5% Na2HPO4 by chromatography CHEMBL3244179
No relevant target Rf = 0.2 Retardation factor, Rf of the compound on silica gel GF containing EtOH-HOAc-H2O (20:2:2)/0.1 M phosphate buffer at 7.4 by chromatography CHEMBL3244179