Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.002977 7
Target name Tax id
DNA (cytosine-5)-methyltransferase 1
DNA (cytosine-5)-methyltransferase 3A
345.790
Chemical Representations
InChI InChI=1S/C16H16ClN5O2/c1-2-24-7-12(14(23)10-3-5-11(17)6-4-10)22-9-21-16-13(22)15(18)19-8-20-16/h3-6,8-9,12H,2,7H2,1H3,(H2,18,19,20)
InChI Key KUAQQWXZBQXKEU-UHFFFAOYSA-N
SMILES CCOCC(C(=O)c1ccc(Cl)cc1)n1cnc2ncnc(N)c21
Molecular Formula C16H16ClN5O2
Functional Fragments
Base Ribose Phosphate
Base Structure
Match
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Calculated Properties
logP 2.522 Computed by RDKit
Heavy Atom Count 24 Computed by RDKit
Ring Count 3 Computed by RDKit
Hydrogen Bond Acceptor Count 7 Computed by RDKit
Hydrogen Bond Donor Count 1 Computed by RDKit
Rotatable Bond Count 6 Computed by RDKit
Topological Polar Surface Area 95.920 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
DNA (cytosine-5)-methyltransferase 3A Inhibition % Inhibition of human C-terminal DNMT3A at 20 uM after 1 hr by fluorescence assay CHEMBL3603802
DNA (cytosine-5)-methyltransferase 3A EC50 = 2100.0 nM Inhibition of human C-terminal DNMT3A after 1 hr by fluorescence assay CHEMBL3603802
DNA (cytosine-5)-methyltransferase 3A Inhibition = 70.0 % Inhibition of human C-terminal DNMT3A at 32 uM after 1 hr by fluorescence assay CHEMBL3603802
DNA (cytosine-5)-methyltransferase 1 Inhibition = 29.0 % Inhibition of human His-DNMT1 using [methyl-3H]SAM as substrate at 100 uM after 2 hrs CHEMBL3603802
No relevant target Stability % Chemical stability of the compound in DMSO by HPLC analysis CHEMBL3603802