Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.003079 2
Target name Tax id
DNA (cytosine-5)-methyltransferase 3B 9606.0
DNA (cytosine-5)-methyltransferase 1 9606.0
338.393
Chemical Representations
InChI InChI=1S/C13H18N6O3S/c14-11-8-12(17-4-16-11)19(5-18-8)13-10(21)9(20)7(22-13)3-23-6-1-15-2-6/h4-7,9-10,13,15,20-21H,1-3H2,(H2,14,16,17)/t7-,9-,10-,13-/m1/s1
InChI Key BULDRNZDSMLACQ-QYVSTXNMSA-N
SMILES Nc1ncnc2c1ncn2[C@@H]1O[C@H](CSC2CNC2)[C@@H](O)[C@H]1O
Molecular Formula C13H18N6O3S
Functional Fragments
Base Ribose Phosphate
Base Structure
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Calculated Properties
logP -1.267 Computed by RDKit
Heavy Atom Count 23 Computed by RDKit
Ring Count 4 Computed by RDKit
Hydrogen Bond Acceptor Count 10 Computed by RDKit
Hydrogen Bond Donor Count 4 Computed by RDKit
Rotatable Bond Count 4 Computed by RDKit
Topological Polar Surface Area 131.340 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
DNA (cytosine-5)-methyltransferase 1 IC50 = 44000.0 nM Inhibition of human recombinant DNMT1 CHEMBL1151876
DNA (cytosine-5)-methyltransferase 3B IC50 > 100000.0 nM Inhibition of human recombinant DNMT3b2 CHEMBL1151876