Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.003248 2
Target name Tax id
DNA (cytosine-5)-methyltransferase 3B 9606.0
DNA (cytosine-5)-methyltransferase 1 9606.0
385.406
Chemical Representations
InChI InChI=1S/C13H19N7O5S/c14-5(13(23)24)1-2-26-3-6-8(21)9(22)12(25-6)20-11-7(18-19-20)10(15)16-4-17-11/h4-6,8-9,12,21-22H,1-3,14H2,(H,23,24)(H2,15,16,17)/t5?,6-,8-,9-,12-/m1/s1
InChI Key ZTAQMRJGWYNIJC-NRJACJQQSA-N
SMILES Nc1ncnc2c1nnn2[C@@H]1O[C@H](CSCCC(N)C(=O)O)[C@@H](O)[C@H]1O
Molecular Formula C13H19N7O5S
Functional Fragments
Base Ribose Phosphate
Base Structure
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Calculated Properties
logP -2.042 Computed by RDKit
Heavy Atom Count 26 Computed by RDKit
Ring Count 3 Computed by RDKit
Hydrogen Bond Acceptor Count 12 Computed by RDKit
Hydrogen Bond Donor Count 5 Computed by RDKit
Rotatable Bond Count 7 Computed by RDKit
Topological Polar Surface Area 195.520 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
DNA (cytosine-5)-methyltransferase 1 IC50 = 8000.0 nM Inhibition of human recombinant DNMT1 expressed in baculovirus infected high five insect cells CHEMBL1151871
DNA (cytosine-5)-methyltransferase 3B IC50 = 3000.0 nM Inhibition of human recombinant DNMT3b2 expressed in baculovirus infected high five insect cells CHEMBL1151871