Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.003706 0 CYTIDINE
Target name Tax id
Putative uncharacterized protein pk7 11103.0
Hexose transporter 1 11103.0
Streptavidin 11103.0
Solute carrier organic anion transporter family member 1B3 11103.0
Glucose transporter 11103.0
Replicase polyprotein 1ab 11103.0
Deoxycytidine kinase 11103.0
Uridine-cytidine kinase 1 11103.0
Thymidine kinase 2 11103.0
Solute carrier organic anion transporter family member 1B1 11103.0
DNA-(apurinic or apyrimidinic site) lyase 11103.0
Calcium-dependent protein kinase 1 11103.0
Cytidine deaminase 11103.0
Mitogen-activated protein kinase 11103.0
Chromobox protein homolog 1 11103.0
Proline--tRNA ligase 11103.0
Calcium-dependent protein kinase 4 11103.0
HERG 11103.0
Thymidine kinase 11103.0
Lysine--tRNA ligase 11103.0
Cdk-related protein kinase 6 11103.0
243.219
Chemical Representations
InChI InChI=1S/C9H13N3O5/c10-5-1-2-12(9(16)11-5)8-7(15)6(14)4(3-13)17-8/h1-2,4,6-8,13-15H,3H2,(H2,10,11,16)/t4-,6-,7-,8-/m1/s1
InChI Key UHDGCWIWMRVCDJ-XVFCMESISA-N
SMILES Nc1ccn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)n1
Molecular Formula C9H13N3O5
Functional Fragments
Base Ribose Phosphate
Base Structure
Match
No Image Available
Match
Calculated Properties
logP -2.563 Computed by RDKit
Heavy Atom Count 17 Computed by RDKit
Ring Count 2 Computed by RDKit
Hydrogen Bond Acceptor Count 8 Computed by RDKit
Hydrogen Bond Donor Count 4 Computed by RDKit
Rotatable Bond Count 2 Computed by RDKit
Topological Polar Surface Area 130.830 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
L1210 Concentration = 0.001 M The concentration required to inhibit the growth of L-1210 leukemic cells was evaluated; 1E-3 to 1E-4 CHEMBL1123079
L1210 Concentration = 0.0001 M The concentration requiredi (cytidine+2'deoxycytidine) to inhibit the growth of L-1210 leukemic cells was evaluated CHEMBL1123079
ST-KM-1 IC50 > 100.0 ug.mL-1 Inhibitory effect tested in vitro for the growth of Stomach adenocarcinoma ST-KM cell line CHEMBL1125937
NUGC-4 IC50 > 100.0 ug.mL-1 Inhibitory effect tested in vitro for the growth of Stomach adenocarcinoma NUGC-4 cell line CHEMBL1125937
MKN-28 IC50 = 4.5 ug.mL-1 Inhibitory effect tested in vitro for the growth of Stomach adenocarcinoma MKN- 28 cell line CHEMBL1125937
OST IC50 > 100.0 ug.mL-1 Inhibitory effect tested in vitro for the growth of Osteosarcoma OST cell line CHEMBL1125937
KHOS-321H IC50 = 0.27 ug.mL-1 Inhibitory effect tested in vitro for the growth of Osteosarcoma KHOS-321H cell line CHEMBL1125937
SK-ES1 IC50 = 0.09 ug.mL-1 Inhibitory effect tested in vitro for the growth of Osteosarcoma SK-ES-1 cell line CHEMBL1125937
HOS-TE85 IC50 = 2.6 ug.mL-1 Inhibitory effect tested in vitro for the growth of Osteosarcoma MNNG-HOS cell line CHEMBL1125937
PC-3 IC50 > 100.0 ug.mL-1 Inhibitory effect tested in vitro for the growth of Lung adenocarcinoma PC-3 cell line CHEMBL1125937
PC-8 IC50 = 0.28 ug.mL-1 Inhibitory effect tested in vitro for the growth of Lung adenocarcinoma PC-8 cell line CHEMBL1125937
PC-9 IC50 = 1.6 ug.mL-1 Inhibitory effect tested in vitro for the growth of Lung adenocarcinoma PC-9 cell line CHEMBL1125937
PC-13 IC50 > 100.0 ug.mL-1 Inhibitory effect tested in vitro for the growth of Lung adenocarcinoma PC-13 cell line CHEMBL1125937
QG-56 IC50 > 100.0 ug.mL-1 Inhibitory effect tested in vitro for the growth of Lung squamous-cell carcinoma QG-56 cell line CHEMBL1125937
SW480 IC50 > 100.0 ug.mL-1 Inhibitory effect tested in vitro for the growth of colon adenocarcinoma SW-480 cell line CHEMBL1125937
Thymidine kinase 2 Inhibition = 13.0 % Ability to inhibit rat mitochondrial thymidine kinase CHEMBL1122068
Thymidine kinase Inhibition = 1.0 % Ability to inhibit rat cytoplasmic Thymidine kinase CHEMBL1122068
Sarcoma-180 Phosphorylating activity = 812.0 pM min-1 assay-1 Phosphorylation by uridine/cytidine kinase(UCK) from mouse sarcoma -180 ascites cells was measured. CHEMBL1131043
No relevant target LogP = -2.29 Partition coefficient (logP) CHEMBL1126075
Cytidine deaminase Relative initial rate = 100.0 Inhibition of cytidine deaminase partially purified from mouse kidney. CHEMBL1122440
ADMET Km = 50000.0 nM Michaelis-Menten constant was determined against cytidine deaminase CHEMBL1121843
Deoxycytidine kinase Km = 6600.0 nM Activity of human dCK expressed in HepG2 cells assessed as phosphorylation by coupled enzyme assay CHEMBL1142170
Uridine-cytidine kinase 1 Km = 131000.0 nM Activity of human UCK1 expressed in Huh7 cells assessed as phosphorylation by coupled enzyme assay CHEMBL1142170
Deoxycytidine kinase Kcat/Km = 0.0014 /uM/s Ratio of Kcat to Km for human dCK expressed in HepG2 cells CHEMBL1142170
Uridine-cytidine kinase 1 Kcat/Km = 0.0038 /uM/s Ratio of Kcat to Km for UCK1 activity expressed in Huh7 cells CHEMBL1142170
Deoxycytidine kinase Kcat = 0.009000000000000001 /s Activity of human dCK expressed in HepG2 cells assessed as phosphorylation by coupled enzyme assay CHEMBL1142170
Uridine-cytidine kinase 1 Kcat = 0.5 /s Activity of human UCK1 expressed in Huh7 cells assessed as phosphorylation by coupled enzyme assay CHEMBL1142170
Ileum Activity = 0.0 % Contractile activity in guinea pig ileum at 1200 ug/ml relative to histamine CHEMBL1151127
Ileum Inhibition = 0.0 % Inhibition of electrically-stimulated contraction in guinea pig ileum at 1200 ug/ml CHEMBL1151127
Radical scavenging activity IC50 > 30000.0 nM Antioxidant activity assessed as DPPH radical scavenging activity after 30 mins CHEMBL1158739
NON-PROTEIN TARGET IC50 > 30000.0 nM Antioxidant activity assessed as authentic peroxynitrite free radical scavenging activity after 30 mins CHEMBL1158739
NON-PROTEIN TARGET IC50 > 30000.0 nM Antioxidant activity assessed as 3-morpholinosydnonimine-derived peroxynitrite free radical scavenging activity after 30 mins CHEMBL1158739
Cytidine deaminase Kcat = 5.4 /s Activity of cloned cytidine deaminase in human HuH7 cells by spectrophotometric analysis CHEMBL1152990
Cytidine deaminase Km = 40000.0 nM Activity of cloned cytidine deaminase in human HuH7 cells by spectrophotometric analysis CHEMBL1152990
Cytidine deaminase Kcat/Km = 0.14 /uM/s Ratio of Kcat to Km for cloned cytidine deaminase in human HuH7 cells by spectrophotometric analysis CHEMBL1152990
Chromobox protein homolog 1 Potency 56234.1 nM PUBCHEM_BIOASSAY: HTS for Inhibitors of HP1-beta Chromodomain Interactions with Methylated Histone Tails. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID488962] CHEMBL1201862
Leishmania infantum IC50 > 32000.0 nM MMV: Inhibition of Leishmania infantum (MHOM/MA/BE/67) in vitro. CHEMBL2028040
MRC5 IC50 > 32000.0 nM MMV: Cytotoxicity against human fibroblasts (MRC-5) cells. CHEMBL2028040
Plasmodium falciparum EC50 = 385.0 nM MMV: Inhibition of Plasmodium falciparum 3D7 (EC50). CHEMBL2028040
Trypanosoma cruzi IC50 > 32000.0 nM MMV: Inhibition of Trypanosoma cruzi (Tulahuen C4 LacZ) (Chagas in vitro). CHEMBL2028040
Trypanosoma brucei brucei IC50 > 32000.0 nM MMV: Inhibition of Trypanosoma brucei brucei (Squib 427) (HAT in vitro). CHEMBL2028040
Trypanosoma brucei rhodesiense IC50 > 32000.0 nM MMV: Inhibition of Trypanosoma brucei rhodesiense (STIB 900) (HAT in vitro). CHEMBL2028040
Mycobacterium tuberculosis Inhibition = 14.6 % MMV: Screen against Mtb, single point, non replicating, at 25uM CHEMBL2094260
Mycobacterium tuberculosis Inhibition = -3.06 % MMV: Screen against Mtb, single point, replicating, at 25uM CHEMBL2094260
Streptavidin Activity Binding affinity to Streptomyces avidinii streptavidin at 4 mM using dye labeled Streptavidin binding aptamer by fluorescence spectral analysis method CHEMBL2202973
Schistosoma mansoni Toxicity = 0.0 MMV: Toxicity @ 2.5 uM to newly transformed Schistosoma mansoni somules after 24 h on a scale of 0 (none) - 4 (most) as judged visually: includes short descriptors of effects (PMID:19597541). Caffrey group UCSF. CHEMBL2363022
Schistosoma mansoni Toxicity = 0.0 MMV: Toxicity @ 2.5 uM to newly transformed Schistosoma mansoni somules after 48 h on a scale of 0 (none) - 4 (most) as judged visually: includes short descriptors of effects (PMID:19597541). Caffrey group UCSF. CHEMBL2363022
Schistosoma mansoni Toxicity = 0.0 MMV: Toxicity @ 2.5 uM to newly transformed Schistosoma mansoni somules after 72 h on a scale of 0 (none) - 4 (most) as judged visually: includes short descriptors of effects (PMID:19597541). Caffrey group UCSF. CHEMBL2363022
Plasmodium falciparum Ratio = 0.6667 MMV: Compounds (1uM) were screened in a 72hr growth assay monitored by flow cytometry both in the presence and absence of supplemental isopentenyl pyrophosphate (IPP) 200uM. Compounds which fail to show anti-malarial activity when chemically rescued by IPP are therefore specific to the apicoplast. The values are expressed as the ratio of the corresponding activity with and without IPP, respectively. CHEMBL2448809
Solute carrier organic anion transporter family member 1B1 Inhibition = 99.44 % Inhibition of sodium fluorescein uptake in OATP1B1-transfected CHO cells at an equimolar substrate-inhibitor concentration of 10 uM CHEMBL3039007
Solute carrier organic anion transporter family member 1B3 Inhibition = 114.03 % Inhibition of sodium fluorescein uptake in OATP1B3-transfected CHO cells at an equimolar substrate-inhibitor concentration of 10 uM CHEMBL3039007
Cryptosporidium parvum Inhibition = 73.84 % MMV: Cryptosporidium parvum oocysts (Iowa Strain) were prepared for use by treatment with 10 mM HCl (37 degrees C, 10 min) followed by 2 mM sodium taurocholate in phosphate-buffered saline (PBS) with Ca2+ and Mg2+ (16 degrees C, 10 min) in order to stimulate excystation. The high-throughput screen was carried out by inoculating >90% confluent human ileocecal adenocarcinoma (HCT-8) cells (ATCC) with ~5.5 x 10^3 primed oocysts per well. Experimental compounds or DMSO (vehicle) were added three hours after infection, and cells were incubated for 48 hours. CHEMBL3137356
Onchocerca lienalis Motility = 100.0 % MMV: Percent motility assay at a compound concentration of 1.25e-5 M. Activity score legend: 3: Active, 2: Moderately active; 1: Inactive, 0: Toxic CHEMBL3137381
Onchocerca lienalis Motility = 100.0 % MMV: Percent motility assay at a compound concentration of 3.1e-6 M. Activity score legend: 3: Active, 2: Moderately active; 1: Inactive, 0: Toxic CHEMBL3137381
Onchocerca lienalis Motility = 100.0 % MMV: Percent motility assay at a compound concentration of 1.9e-7 M. Activity score legend: 3: Active, 2: Moderately active; 1: Inactive, 0: Toxic CHEMBL3137381
Onchocerca lienalis Motility = 100.0 % MMV: Percent motility assay at a compound concentration of 7.8e-7 M. Activity score legend: 3: Active, 2: Moderately active; 1: Inactive, 0: Toxic CHEMBL3137381
DNA-(apurinic or apyrimidinic site) lyase Potency 354.8 nM PubChem BioAssay. qHTS Assay for Inhibitors of the Human Apurinic/apyrimidinic Endonuclease 1 (APE1). (Class of assay: confirmatory) CHEMBL1201862
Toxoplasma gondii IC50 > 30000.0 nM MMV: A total of 100ul of inoculum was added to each well (parasite/cell ratio, ~10:1; final volume, 200 ul). Six hours after inoculation, nonadherent parasites were removed, and 100 ul of complete DMEM (1% penicillin-streptomycin, 3% FBS) supplemented with inhibitors at different concentrations (2-fold serial dilutions starting from 30 uM) was added to all except the negative-control wells. Positive controls, consisting of pyrimethamine (PYR) and sulfadiazine (SDZ) (20-mg/ml stocks in DMSO), were tested at a 2mg/ml final concentration. Each test was performed in triplicate. CHEMBL3301448
Entamoeba histolytica IC50 > 30000.0 nM MMV: Primary screening was performed with each compound at a 30 uM final concentration and in triplicate in sealed 96-well polystyrene microtiter plates. Parasite inocula (100 ul) comprising 20000 parasites/ml were added to each well and grown at 37 degrees C in a humidified atmosphere of 5% CO2 for 72 h. Positive controls consisted of metronidazole at 1 mg/ml. The growth of E. histolytica trophozoites in each well was determined microscopically by measuring the diameters of the confluent cells in drug-containing wells relative to those in the nega- tive-control wells. CHEMBL3301448
Plasmodium berghei Inhibition = -17.3 % MMV: P. berghei-infected blood was withdrawn from mice by cardiac pucture before being immediately added to ookinete culture medium containing test compounds. 26 hr later, GFP-positive ookinetes were identified and counted by automated microscopy. All compounds were tested in 4 independent experiments and data presented here is the mean. CHEMBL3301451
Plasmodium falciparum Inhibition = -18.78 % MMV: P. falciparum NF54 functionally mature Stage V gametocytes were incubated for 24 hr in the presence of the test compounds. Gamete formation was then triggered by addition of 2uM xantheurenic acid and temperature decrease to ~20C. Male gamete exflagellation was recorded and analysed by automated microscopy after 20 min. All compounds were tested in 4 independent experiments and data presented here is the mean. CHEMBL3301451
Plasmodium falciparum Inhibition = -25.67 % MMV: P. falciparum NF54 functionally mature Stage V gametocytes were incubated for 24 hr in the presence of the test compounds. Gamete formation was then triggered by addition of 2uM xantheurenic acid and temperature decrease to ~20C. Female gamete formation was recorded 24 hr later by automated microscopy detection of surface labelling of female gametes with a Cy3-conjugated antibody reactive to Pfs25. All compounds were tested in 4 independent experiments and data presented here is the mean. CHEMBL3301451
HERG Inhibition = 0.0 % MMV: Malaria Box compounds were tested for inhibition of the human ether a go-go related gene (hERG), Kv11.1 channel, using IonWorks 384-well patch clamp electrophysiology at 1.1uM (3 independent assay plates up to 12 cells per concentration). CHEMBL3301458
HERG Inhibition = 8.0 % MMV: Malaria Box compounds were tested for inhibition of the human ether a go-go related gene (hERG), Kv11.1 channel, using IonWorks 384-well patch clamp electrophysiology at 11.1uM (3 independent assay plates up to 12 cells per concentration). CHEMBL3301458
Unchecked IC50 = 7310.0 nM MMV: Anti-babesial activity assay. Parasite pRBCs at 1% parasitemia were cultivated in 100 ul with 96-well plates at 2.5% and 5% hematocrits. The parasites were cultivated in triplicate for 4 days without replacement of the medium for each concentration of the compound. On the fourth day of culture, lysis buffer containing 2x SGI was added and 50% inhibitory concentration (IC50) values were calculated. CHEMBL3301464
Unchecked IC50 = 4270.0 nM MMV: Anti-babesial activity assay. Parasite pRBCs at 1% parasitemia were cultivated in 100 ul with 96-well plates at 2.5% and 5% hematocrits. The parasites were cultivated in triplicate for 4 days without replacement of the medium for each concentration of the compound. On the fourth day of culture, lysis buffer containing 2x SGI was added and 50% inhibitory concentration (IC50) values were calculated. CHEMBL3301464
Unchecked IC50 = 19130.0 nM MMV: Anti-babesial activity assay. Parasite pRBCs at 1% parasitemia were cultivated in 100 ul with 96-well plates at 2.5% and 5% hematocrits. The parasites were cultivated in triplicate for 4 days without replacement of the medium for each concentration of the compound. On the fourth day of culture, lysis buffer containing 2x SGI was added and 50% inhibitory concentration (IC50) values were calculated. CHEMBL3301464
Unchecked IC50 = 14090.0 nM MMV: Anti-babesial activity assay. Parasite pRBCs at 1% parasitemia were cultivated in 100 ul with 96-well plates at 2.5% and 5% hematocrits. The parasites were cultivated in triplicate for 4 days without replacement of the medium for each concentration of the compound. On the fourth day of culture, lysis buffer containing 2x SGI was added and 50% inhibitory concentration (IC50) values were calculated. CHEMBL3301464
NON-PROTEIN TARGET % Cell Death = 24.0 MMV: MTT Cytotoxicity Assay Day 7 pi of Assay #7 (compound washed out Day 1 pi), U87-CD4-CXCR4 cells, % cell death @ 5mM compound CHEMBL3301472
Human immunodeficiency virus 1 Inhibition = -6900.0 % MMV: HIV CCR5-tropic env JRFL pseudovirus assay produces luciferase signal in lieu of replicating viral particles Day 3 pi, U87-CD4-CCR5, % inhibition at 5 mM compound CHEMBL3301472
Human immunodeficiency virus 1 Inhibition = -700.0 % MMV: HIV JRFL CCR5-tropic replication-competent virus, NO washout, P24 ELISA Day 7 pi, U87-CD4-CCR5, % inhibition at 5 mM compound CHEMBL3301472
Human immunodeficiency virus 1 Inhibition = 1400.0 % MMV: HIV CXCR4-tropic env NL4-3 pseudovirus assay produces luciferase signal in lieu of replicating viral particles Day 3 pi, U87-CD4-CXCR4, % inhibition at 5 mM compound CHEMBL3301472
Human immunodeficiency virus 1 Inhibition = 600.0 % MMV: HIV NL4-3 CXCR4-tropic replication-competent virus, NO washout, P24 ELISA Day 7 pi, U87-CD4-CXCR4, % inhibition at 5 mM compound CHEMBL3301472
Human immunodeficiency virus 1 Inhibition = -3700.0 % MMV: HIV CXCR4-tropic env HxB2 pseudovirus assay produces luciferase signal in lieu of replicating viral particles Day 3 pi, U87-CD4-CXCR4, % inhibition at 5 mM compound CHEMBL3301472
NON-PROTEIN TARGET % Cell Death = 26.0 MMV: MTT Cytotoxicity Assay Day 7 pi of Assay #10 (NO washout), U87-CD4-CCR5 cells, % cell death @ 5mM compound CHEMBL3301472
NON-PROTEIN TARGET % Cell Death = -30.0 MMV: MTT Cytotoxicity Assay Day 3 pi, U87-CD4-CCR5 cells, % cell death @ 5mM compound CHEMBL3301472
NON-PROTEIN TARGET % Cell Death = 0.0 MMV: MTT Cytotoxicity Assay Day 7 pi of Assay #11 (NO washout), U87-CD4-CXCR4 cells, % cell death @ 5mM compound CHEMBL3301472
NON-PROTEIN TARGET % Cell Death = 28.0 MMV: MTT Cytotoxicity Assay Day 3 pi, U87-CD4-CXCR4 cells, % cell death @ 5mM compound CHEMBL3301472
Human immunodeficiency virus 1 Inhibition = -1800.0 % MMV: HIV JRFL CCR5-tropic replication-competent virus, virus & compound washed out Day 1 pi, P24 ELISA Day 7 pi, U87-CD4-CCR5, % inhibition at 5 mM compound CHEMBL3301472
Human immunodeficiency virus 1 Inhibition = 2700.0 % MMV: HIV NL4-3 CXCR4-tropic replication-competent virus, virus & compound washed out Day 1 pi, P24 ELISA Day 7 pi, U87-CD4-CXCR4, % inhibition at 5 mM compound CHEMBL3301472
NON-PROTEIN TARGET % Cell Death = -9.0 MMV: MTT Cytotoxicity Assay Day 7 pi of Assay #6 (compound washed out Day 1 pi), U87-CD4-CCR5 cells, % cell death @ 5mM compound CHEMBL3301472
NCI/ADR-RES Inhibition = 70.08 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Ovarian Cancer cell line NCI/ADR-RES CHEMBL3301486
ACHN Inhibition = 79.47 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Renal Cancer cell line ACHN CHEMBL3301486
COLO 205 Inhibition = 109.56 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Colon Cancer cell line COLO 205 CHEMBL3301486
MOLT-4 Inhibition = 57.13 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Leukemia cell line MOLT-4 CHEMBL3301486
UACC-257 Inhibition = 90.08 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Melanoma cell line UACC-257 CHEMBL3301486
CAKI-1 Inhibition = 91.32 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Renal Cancer cell line CAKI-1 CHEMBL3301486
TK-10 Inhibition = 124.52 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Renal Cancer cell line TK-10 CHEMBL3301486
MCF7 Inhibition = 63.14 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Breast Cancer cell line MCF7 CHEMBL3301486
OVCAR-3 Inhibition = 88.71 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Ovarian Cancer cell line OVCAR-3 CHEMBL3301486
RXF 393 Inhibition = 50.13 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Renal Cancer cell line RXF 393 CHEMBL3301486
SN12C Inhibition = 54.88 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Renal Cancer cell line SN12C CHEMBL3301486
UO-31 Inhibition = 100.43 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Renal Cancer cell line UO-31 CHEMBL3301486
Unchecked Inhibition = 82.83 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Breast Cancer cell line MDA-MB-231/ATCC CHEMBL3301486
Unchecked Inhibition = 98.98 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Colon Cancer cell line HCC-2998 CHEMBL3301486
RPMI-8226 Inhibition = 49.81 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Leukemia cell line RPMI-8226 CHEMBL3301486
UACC-62 Inhibition = 95.91 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Melanoma cell line UACC-62 CHEMBL3301486
OVCAR-4 Inhibition = 72.27 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Ovarian Cancer cell line OVCAR-4 CHEMBL3301486
SR Inhibition = 2.991 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Leukemia cell line SR CHEMBL3301486
Unchecked Inhibition = 46.59 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Non-Small Cell Lung Cancer cell line A549/ATCC CHEMBL3301486
MDA-MB-468 Inhibition = 96.83 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Breast Cancer cell line MDA-MB-468 CHEMBL3301486
HCT-116 Inhibition = 64.35 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Colon Cancer cell line HCT-116 CHEMBL3301486
OVCAR-5 Inhibition = 104.12 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Ovarian Cancer cell line OVCAR-5 CHEMBL3301486
Unchecked Inhibition = 75.53 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Melanoma cell line LOX IMVI CHEMBL3301486
HOP-62 Inhibition = 65.03 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Non-Small Cell Lung Cancer cell line HOP-62 CHEMBL3301486
Unchecked Inhibition = 99.17 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Breast Cancer cell line T-47D CHEMBL3301486
HOP-92 Inhibition = 73.17 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Non-Small Cell Lung Cancer cell line HOP-92 CHEMBL3301486
OVCAR-8 Inhibition = 58.47 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Ovarian Cancer cell line OVCAR-8 CHEMBL3301486
SF-268 Inhibition = 86.2 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human CNS Cancer cell line SF-268 CHEMBL3301486
Unchecked Inhibition = 105.57 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Colon Cancer cell line HT29 CHEMBL3301486
M14 Inhibition = 107.42 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Melanoma cell line M14 CHEMBL3301486
SK-OV-3 Inhibition = 90.21 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Ovarian Cancer cell line SK-OV-3 CHEMBL3301486
SF-295 Inhibition = 58.55 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human CNS Cancer cell line SF-295 CHEMBL3301486
KM12 Inhibition = 72.08 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Colon Cancer cell line KM12 CHEMBL3301486
Malme-3M Inhibition = 108.64 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Melanoma cell line MALME-3M CHEMBL3301486
NCI-H23 Inhibition = 71.8 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Non-Small Cell Lung Cancer cell line NCI-H23 CHEMBL3301486
DU-145 Inhibition = 94.37 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Prostate Cancer cell line DU-145 CHEMBL3301486
SF-539 Inhibition = 73.13 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human CNS Cancer cell line SF-539 CHEMBL3301486
SW-620 Inhibition = 72.7 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Colon Cancer cell line SW-620 CHEMBL3301486
MDA-MB-435 Inhibition = 88.77 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Melanoma cell line MDA-MB-435 CHEMBL3301486
NCI-H322M Inhibition = 113.94 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Non-Small Cell Lung Cancer cell line NCI-H322M CHEMBL3301486
PC-3 Inhibition = 85.57 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Prostate Cancer cell line PC-3 CHEMBL3301486
CCRF-CEM Inhibition = 29.17 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Leukemia cell line CCRF-CEM CHEMBL3301486
SK-MEL-2 Inhibition = 110.42 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Melanoma cell line SK-MEL-2 CHEMBL3301486
SNB-19 Inhibition = 101.28 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human CNS Cancer cell line SNB-19 CHEMBL3301486
NCI-H460 Inhibition = 59.76 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Non-Small Cell Lung Cancer cell line NCI-H460 CHEMBL3301486
786-0 Inhibition = 95.21 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Renal Cancer cell line 786-0 CHEMBL3301486
SNB-75 Inhibition = 76.88 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human CNS Cancer cell line SNB-75 CHEMBL3301486
HL-60 Inhibition = 99.75 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Leukemia cell line HL-60(TB) CHEMBL3301486
SK-MEL-28 Inhibition = 76.39 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Melanoma cell line SK-MEL-28 CHEMBL3301486
NCI-H522 Inhibition = 71.21 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Non-Small Cell Lung Cancer cell line NCI-H522 CHEMBL3301486
A498 Inhibition = 106.14 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Renal Cancer cell line A498 CHEMBL3301486
BT-549 Inhibition = 111.03 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Breast Cancer cell line BT-549 CHEMBL3301486
SK-MEL-5 Inhibition = 89.92 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Melanoma cell line SK-MEL-5 CHEMBL3301486
Unchecked Inhibition = 105.62 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Breast Cancer cell line HS 578T CHEMBL3301486
U-251 Inhibition = 48.89 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human CNS Cancer cell line U251 CHEMBL3301486
Unchecked Inhibition = 74.3 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Leukemia cell line K-562 CHEMBL3301486
IGROV-1 Inhibition = 82.92 % MMV: NCI60 panel. Malaria Box compounds were tested for inhibition of the human Ovarian Cancer cell line IGROV1 CHEMBL3301486
Saccharomyces cerevisiae Relative Growth = 0.1163 MMV: Growth assays were conducted using the prototrophic S. cerevisiae strain JHY222. Each MMV compound (0.1 mM) was tested in minimal media containing dextrose as a carbon source (Yeast Nitrogen Base, Dextrose; YNBD). The growth rate in the presence of each MMV compound was calculated as follows: (i) the first 10 OD readings were averaged and subtracted from all OD readings of the corresponding curve to set the baseline of the growth curve to zero, and (ii) the area under the curve (AUC) was then calculated as the sum of all OD readings. AUC was calculated following 80 OD readings, corresponding to roughly 20 h of growth. A relative growth value was calculated as follows: AUC(DRUG) - AUC(DMSO)/AUC(DMSO); where AUC(DMSO) represents growth measured in a DMSO control well that was on the same microtiter plate of the drug-treated culture. A relative growth value near zero means the compound had little or no effect on growth, whereas a value near -1 means the compound strongly or completely inhibited growth. CHEMBL3301546
Saccharomyces cerevisiae Relative Growth = -0.4063 MMV: Growth assays were conducted using the prototrophic S. cerevisiae strain JHY222. Each MMV compound (0.1 mM) was tested in minimal media containing ethanol and glycerol as carbon sources (Yeast Nitrogen Base, Ethanol, Glycerol; YNBEG). The growth rate in the presence of each MMV compound was calculated as follows: (i) the first 10 OD readings were averaged and subtracted from all OD readings of the corresponding curve to set the baseline of the growth curve to zero, and (ii) the area under the curve (AUC) was then calculated as the sum of all OD readings. AUC was calculated following 180 OD readings, corresponding to roughly 45 h of growth. A relative growth value was calculated as follows: AUC(DRUG) - AUC(DMSO)/AUC(DMSO); where AUC(DMSO) represents growth measured in a DMSO control well that was on the same microtiter plate of the drug-treated culture. A relative growth value near zero means the compound had little or no effect on growth, whereas a value near -1 means the compound strongly or completely inhibited growth. CHEMBL3301546
Saccharomyces cerevisiae Relative Growth = -0.0768 MMV: Growth assays were conducted using the prototrophic S. cerevisiae strain JHY222. Each MMV compound (0.1 mM) was tested in rich media containing dextrose as a carbon source (Yeast Extract, Peptone, Dextrose; YPD). The growth rate in the presence of each MMV compound was calculated as follows: (i) the first 10 OD readings were averaged and subtracted from all OD readings of the corresponding curve to set the baseline of the growth curve to zero, and (ii) the area under the curve (AUC) was then calculated as the sum of all OD readings. AUC was calculated following 80 OD readings corresponding to roughly 20 h of growth. A relative growth value was calculated as follows: AUC(DRUG) - AUC(DMSO)/AUC(DMSO); where AUC(DMSO) represents growth measured in a DMSO control well that was on the same microtiter plate of the drug-treated culture. A relative growth value near zero means the compound had little or no effect on growth, whereas a value near -1 means the compound strongly or completely inhibited growth. CHEMBL3301546
Plasmodium falciparum Growth Inhibition = 13.52 % MMV: Measure of pLDH activity as indication of parasite viability. Gametocytogenesis of 3D7 Plasmodium falciparum strain was induced in vitro and asexual parasites were depleted with N-acetylglucosamine. Gametocytes were treated with dihydroartemisinin, epoxomicin, methylene blue, primaquine, puromycin or chloroquine in 96-well plates and the pLDH activity was evaluated using a modified Makler protocol. Mosquito infectivity was measured by the standard membrane feeding assay. CHEMBL3301555
Putative uncharacterized protein pk7 IC50 > 1000.0 nM MMV: PK7 Protein kinase inhibition assay using recombinant PfPK7, ATP and KinaseGlo to measure % inhibition at 1 uM MMV box compound. Final concentrations were 1 uM ATP, 2 mM DTT, 20 mM MgCl2, 2 mM MnCl2, 0.01% BSA, and 6 ug/ml PK7, in a buffer of 20 mM Tris-HCl (pH 7.5). The enzyme itself was the only substrate present (since autophosphorylation occurs); 100 uM 1NA-PP1 was used as a control inhibitor. Incubation time was 3 hours. CHEMBL3301562
Mitogen-activated protein kinase IC50 > 1000.0 nM MMV: MAP2K Protein kinase inhibition assay using recombinant PfMAP2K, protein substrate, ATP and KinaseGlo to measure % inhibition at 1 uM MMV box compound. Final concentrations were 1 uM ATP, 0.5 mM DTT, 1 mM MgCl2, 0.5 mg/mL BSA, and 10 ug/ml MAP2 in a buffer of 50 mM HEPES (pH 7.0). 0.5 mg/mL histone III-S served as the substrate (13); 100 uM AMP-PNP, an ATP analog, was used as a control inhibitor. Incubation time was 4 hours. CHEMBL3301562
Proline--tRNA ligase IC50 > 2500.0 nM MMV: ProRS recombinant Plasmodium falciparum Prolyl-tRNA-synthetase, assay with yeast tRNA, ATP, and proline and 3 uM MMV malaria box compound, assay read out with kinase glo as % inhibition. CHEMBL3301562
Calcium-dependent protein kinase 1 IC50 > 1000.0 nM MMV: CDPK1 Protein kinase inhibition assay using recombinant PfCDPK1, syntide 2 peptide substrate, ATP and KinaseGlo to measure % inhibition at 1 uM MMV box compound. CHEMBL3301562
Lysine--tRNA ligase IC50 > 2500.0 nM MMV: KRS recombinant Plasmodium falciparum Lysyl-tRNA-synthetase, assay with yeast tRNA, ATP, and lysine and 3 uM MMV malaria box compound, assay read out with kinase glo as % inhibition. CHEMBL3301562
Cdk-related protein kinase 6 IC50 > 1000.0 nM MMV: PK6 Protein kinase inhibition assay using recombinant PfPK6, Myelin Basic Protein (MBP) substrate, ATP and KinaseGlo to measure % inhibition at 1 uM MMV box compound. Final concentrations were 1.5 uM ATP, 5 mM MnCl2, and 15 ug/ml PK6 in a buffer of 100 mM Tris-HCl (pH 7.5). 50 ug/mL MBP was provided as the substrate; 10 uM staurosporine was used as a control inhibitor. Incubation time was 3 hours and 40 minutes.The catalytic activity of each kinase was considered proportional to ATP consumed, as determined from measurements of residual [ATP] with the luciferase-based reagent Kinase-Glo (Promega) following incubation. Luminescence (proportional to residual [ATP]) was measured on the plate readers FLx800 (BioTek Instruments, Winooski, VT, USA) and MicroBeta2. CHEMBL3301562
Calcium-dependent protein kinase 4 IC50 > 1000.0 nM MMV: CDPK4 Protein kinase inhibition assay using recombinant PfCDPK4, syntide2 peptide substrate, ATP and KinaseGlo to measure % inhibition at 1 uM MMV box compound. CHEMBL3301562
Hexose transporter 1 IC50 > 12000.0 nM ST_JUDE_LEISH: Cytotoxicity against transgenic Leishmania Mexicana promastigotes LmPfHT that are glucose transport deficient and complemented with the Plasmodium falciparum hexose transporter. Activity is measured by by DNA content using SYBR green in vitro CHEMBL3433997
Glucose transporter IC50 > 12000.0 nM ST_JUDE_LEISH: Cytotoxicity against transgenic Leishmania Mexicana promastigotes LmGT2 that are glucose transport deficient and complemented with the L. Mexicana glucose transporter 2. Activity is measured by by DNA content using SYBR green in vitro CHEMBL3433997
Glucose transporter IC50 > 12000.0 nM ST_JUDE_LEISH: Cytotoxicity against transgenic Leishmania Mexicana promastigotes LmGLUT1 that are glucose transport deficient and complemented with the human glucose transporter GLUT1. Activity is measured by DNA content using SYBR green in vitro CHEMBL3433997
Replicase polyprotein 1ab Inhibition = 7.65 % SARS-CoV-2 3CL-Pro protease inhibition percentage at 20µM by FRET kind of response from peptide substrate CHEMBL4495564
SARS-CoV-2 Inhibition = -0.08 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging CHEMBL4495565
SARS-CoV-2 Inhibition = -0.08 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging CHEMBL4495565
Hepatitis C virus EC50 = 50000.0 nM Antiviral activity against HCV by replicon assay CHEMBL5131483