Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.003861 0
Target name Tax id
DNA polymerase beta
DNA-directed RNA polymerase
mitochondrial
517.164
Chemical Representations
InChI InChI=1S/C10H16F2N3O13P3/c11-3-10(4-25-30(21,22)28-31(23,24)27-29(18,19)20)7(16)6(12)8(26-10)15-2-1-5(13)14-9(15)17/h1-2,6-8,16H,3-4H2,(H,21,22)(H,23,24)(H2,13,14,17)(H2,18,19,20)/t6-,7+,8-,10-/m1/s1
InChI Key CXWKHWVZEMHLHY-IBCQBUCCSA-N
SMILES Nc1ccn([C@@H]2O[C@](CF)(COP(=O)(O)OP(=O)(O)OP(=O)(O)O)[C@@H](O)[C@H]2F)c(=O)n1
Molecular Formula C10H16F2N3O13P3
Functional Fragments
Base Ribose Phosphate
Base Structure
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Calculated Properties
logP -0.895 Computed by RDKit
Heavy Atom Count 31 Computed by RDKit
Ring Count 2 Computed by RDKit
Hydrogen Bond Acceptor Count 12 Computed by RDKit
Hydrogen Bond Donor Count 6 Computed by RDKit
Rotatable Bond Count 9 Computed by RDKit
Topological Polar Surface Area 250.190 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
DNA-directed RNA polymerase, mitochondrial Activity Binding affinity to human mitochondrial RNA polymerase assessed as compound incorporation using [33P]RNA/DNA primer/templates used by agarose gel electrophoresis CHEMBL3414561
DNA-directed RNA polymerase, mitochondrial Inhibition % Inhibition of human mitochondrial RNA polymerase assessed as 13-mer product using [33P]RNA/DNA primer/templates used by agarose gel electrophoresis CHEMBL3414561
Unchecked Inhibition < 50.0 % Inhibition of human DNA-directed RNA polymerase 2 using cytomegalovirus DNA fragment as substrate CHEMBL3414561
Unchecked Inhibition < 50.0 % Inhibition of human DNA-dependent DNA polymerase gamma using calf thymus DNA/[3H]dTTP as substrate by microplate scintillation reader CHEMBL3414561
DNA polymerase beta Inhibition < 50.0 % Inhibition of human DNA-dependent DNA polymerase beta using calf thymus DNA/[3H]dTTP as substrate by microplate scintillation reader CHEMBL3414561
Unchecked Inhibition < 50.0 % Inhibition of human DNA-dependent DNA polymerase alpha using calf thymus DNA/[3H]dTTP as substrate by microplate scintillation reader CHEMBL3414561
Unchecked IC50 = 120.0 nM Inhibition of Respiratory syncytial virus RNA polymerase in crude RSV RNP complex assessed as inhibition of [33P]CMP incorporation into RNA chain CHEMBL3414561