Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.004343 0 PSI-352666
Target name Tax id
DNA polymerase beta
Hepatitis C virus NS5B RNA-dependent RNA polymerase
DNA polymerase alpha subunit
539.199
Chemical Representations
InChI InChI=1S/C11H17FN5O13P3/c1-11(12)6(18)4(2-27-32(23,24)30-33(25,26)29-31(20,21)22)28-9(11)17-3-14-5-7(17)15-10(13)16-8(5)19/h3-4,6,9,18H,2H2,1H3,(H,23,24)(H,25,26)(H2,20,21,22)(H3,13,15,16,19)/t4-,6-,9-,11-/m1/s1
InChI Key GFEXCNGIPRYQFE-GITKWUPZSA-N
SMILES C[C@@]1(F)[C@H](O)[C@@H](COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O[C@H]1n1cnc2c(=O)[nH]c(N)nc21
Molecular Formula C11H17FN5O13P3
Functional Fragments
Base Ribose Phosphate
Base Structure
Match
No Image Available
Match
Calculated Properties
logP -0.968 Computed by RDKit
Heavy Atom Count 33 Computed by RDKit
Ring Count 3 Computed by RDKit
Hydrogen Bond Acceptor Count 13 Computed by RDKit
Hydrogen Bond Donor Count 7 Computed by RDKit
Rotatable Bond Count 8 Computed by RDKit
Topological Polar Surface Area 278.870 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
ADMET CC50 > 100000.0 nM Cytotoxicity against human HuH7 cells CHEMBL1629430
Hepatitis C virus NS5B RNA-dependent RNA polymerase IC50 = 5940.0 nM Inhibition of HCV NS5B polymerase CHEMBL1629430
Unchecked IC50 = 5940.0 nM Inhibition of HCV NS5B polymerase CHEMBL1671830
Hepatitis C virus NS5B RNA-dependent RNA polymerase IC50 = 99.0 nM Inhibition of HCV NS5B RNA-dependent RNA polymerase activity assessed as reduction in radiolabeled ribonucleotide monophosphates incorporation into RNA using cIRES template measured after 2 hrs by microscintillation counting method CHEMBL4622986
DNA polymerase alpha subunit Inhibition = 78.7 % Inhibition of human DNA polymerase alpha at 100 uM using calf DNA as substrate by microbeta scintillation counting method relative to control CHEMBL4622986
DNA polymerase beta Inhibition = 14.3 % Inhibition of human DNA polymerase beta at 100 uM using calf DNA as substrate by microbeta scintillation counting method relative to control CHEMBL4622986
Unchecked Inhibition = 24.6 % Inhibition of human DNA polymerase gamma at 100 uM using calf DNA as substrate by microbeta scintillation counting method relative to control CHEMBL4622986
Unchecked IC50 > 100000.0 nM Inhibition of RNA polymerase 2 in human HeLa cell nuclear extract assessed as reduction in RNA transcription by polyacrylamide gel electrophoresis method CHEMBL4622986
Unchecked Activity Substrate activity at human mitochondrial RNA polymerase assessed as nucleotide incorporation into RNA at 100 uM using [33P]-labeled 5'-UUUUGCCGCGCC-3' and 3'-CGGCGCGGCACGTAAGGG-5' RNA/DNA primer/template by polyacrylamide gel electrophoresis method CHEMBL4622986