Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.004415 0 INX-09114
Target name Tax id
DNA polymerase beta
Hepatitis C virus NS5B RNA-dependent RNA polymerase
DNA polymerase alpha subunit
537.208
Chemical Representations
InChI InChI=1S/C11H18N5O14P3/c1-11(19)6(17)4(2-27-32(23,24)30-33(25,26)29-31(20,21)22)28-9(11)16-3-13-5-7(16)14-10(12)15-8(5)18/h3-4,6,9,17,19H,2H2,1H3,(H,23,24)(H,25,26)(H2,20,21,22)(H3,12,14,15,18)/t4-,6-,9-,11-/m1/s1
InChI Key XIWOELIBNPGBLO-GITKWUPZSA-N
SMILES C[C@@]1(O)[C@H](O)[C@@H](COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O[C@H]1n1cnc2c(=O)[nH]c(N)nc21
Molecular Formula C11H18N5O14P3
Functional Fragments
Base Ribose Phosphate
Base Structure
Match
No Image Available
Match
Calculated Properties
logP -1.946 Computed by RDKit
Heavy Atom Count 33 Computed by RDKit
Ring Count 3 Computed by RDKit
Hydrogen Bond Acceptor Count 14 Computed by RDKit
Hydrogen Bond Donor Count 8 Computed by RDKit
Rotatable Bond Count 8 Computed by RDKit
Topological Polar Surface Area 299.100 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
Unchecked Inhibition % Inhibition of HCV C-terminal His-tagged NS5Bdelta21 enzyme assessed as reduction in NS5B-mediated RNA polymerization using [32P]-GpG primer, RNA template and rNTP nucleotide mix incubated for 120 mins by PAGE method CHEMBL3421565
Unchecked IC50 = 5600.0 nM Inhibition of HCV C-terminal His-tagged NS5Bdelta21 enzyme assessed as reduction in NS5B-mediated RNA polymerization using [32P]-GpG primer, RNA template and rNTP nucleotide mix incubated for 120 mins by PAGE method CHEMBL3421565
Unchecked Inhibition % Inhibition of HCV C-terminal His-tagged NS5Bdelta21 enzyme assessed as induction of pausing at sites of GMP incorporation during NS5B-mediated RNA polymerization using [32P]-GpG primer, RNA template and rNTP nucleotide mix incubated for 120 mins by PAGE method CHEMBL3421565
Hepatocyte Drug metabolism Drug level in human primary hepatocytes treated with 50 uM Ethyl 3-(2-(((R)-(((2R,3R,4R,5R)-5-(2,6-Diamino-9H-purin-9-yl)-3,4-dihydroxy-4-methyltetrahydrofuran-2-yl)methoxy)(((S)-1-ethoxy-1-oxopropan-2-yl)amino)phosphoryl)oxy)phenyl)-propanoate assessed as compound formation incubated for 4 hrs at 37 degC by LC-MS/MS method CHEMBL3421565
ADMET Drug metabolism Drug level in human HuH7 cells treated with 50 uM Ethyl 3-(2-(((R)-(((2R,3R,4R,5R)-5-(2,6-Diamino-9H-purin-9-yl)-3,4-dihydroxy-4-methyltetrahydrofuran-2-yl)methoxy)(((S)-1-ethoxy-1-oxopropan-2-yl)amino)phosphoryl)oxy)phenyl)-propanoate assessed as compound formation incubated for 4 hrs at 37 degC by LC-MS/MS method CHEMBL3421565
Hepatocyte Drug metabolism Drug level in human primary hepatocytes treated with 50 uM beta-D-2,6-diaminopurine nucleoside assessed as compound formation incubated for 4 hrs at 37 degC by LC-MS/MS method CHEMBL3421565
ADMET Drug metabolism Drug level in human HuH7 cells treated with 50 uM beta-D-2,6-diaminopurine nucleoside assessed as compound formation incubated for 4 hrs at 37 degC by LC-MS/MS method CHEMBL3421565
ADMET Drug metabolism Drug level in human HuH7 cells treated with 50 uM Isopropyl 3-(2-(((S)-(((2R,3S,4R,5R)-5-(2,6-Diamino-9H-purin-9-yl)-3,4-dihydroxy-4-methyltetrahydrofuran-2-yl)methoxy)-(((S)-1-isopropoxy-1-oxopropan-2-yl)amino)phosphoryl)oxy)-phenyl)propanoate 15c(Sp) and Isopropyl 3-(2-(((R)-(((2R,3S,4R,5R)-5-(2,6-Diamino-9H-purin-9-yl)-3,4-dihydroxy-4-methyltetrahydrofuran-2-yl)methoxy)(((S)-1-isopropoxy-1-oxopropan-2-yl)amino)phosphoryl)oxy)phenyl)propanoate assessed as compound formation incubated for 4 hrs at 37 degC by LC-MS/MS method CHEMBL3421565
Hepatocyte Drug metabolism Drug level in human primary hepatocytes treated with 50 uM Isopropyl 3-(2-(((S)-(((2R,3S,4R,5R)-5-(2,6-Diamino-9H-purin-9-yl)-3,4-dihydroxy-4-methyltetrahydrofuran-2-yl)methoxy)-(((S)-1-isopropoxy-1-oxopropan-2-yl)amino)phosphoryl)oxy)-phenyl)propanoate 15c(Sp) and Isopropyl 3-(2-(((R)-(((2R,3S,4R,5R)-5-(2,6-Diamino-9H-purin-9-yl)-3,4-dihydroxy-4-methyltetrahydrofuran-2-yl)methoxy)(((S)-1-isopropoxy-1-oxopropan-2-yl)amino)phosphoryl)oxy)phenyl)propanoate assessed as compound formation incubated for 4 hrs at 37 degC by LC-MS/MS method CHEMBL3421565
ADMET Drug metabolism Drug level in human HuH7 cells treated with 2-Amino-6-[N-(t-butyloxycarbonyl)aminoxy]-9H-(2'-C-methyl-beta-D-ribofuranosyl)-purine at 50 uM after 4 hrs by LC-MS/MS analysis CHEMBL3792308
ADMET Drug metabolism Drug level in human HuH7 cells treated with Ethyl((((2R,3S,4R,5R)-5-(2-amino-6-(((tert-butoxycarbonyl)amino)oxy)-9H-purin-9-yl)-3,4-dihydroxy-4-methyltetrahydrofuran-2-yl)methoxy)(phenoxy)phosphoryl)-Lalaninate at 50 uM after 4 hrs by LC-MS/MS analysis CHEMBL3792308
Hepatitis C virus NS5B RNA-dependent RNA polymerase IC50 = 420.0 nM Inhibition of HCV NS5B RNA-dependent RNA polymerase activity assessed as reduction in radiolabeled ribonucleotide monophosphates incorporation into RNA using cIRES template measured after 2 hrs by microscintillation counting method CHEMBL4622986
DNA polymerase alpha subunit Inhibition = 3.6 % Inhibition of human DNA polymerase alpha at 100 uM using calf DNA as substrate by microbeta scintillation counting method relative to control CHEMBL4622986
DNA polymerase beta Inhibition = 15.3 % Inhibition of human DNA polymerase beta at 100 uM using calf DNA as substrate by microbeta scintillation counting method relative to control CHEMBL4622986
Unchecked Inhibition = 7.1 % Inhibition of human DNA polymerase gamma at 100 uM using calf DNA as substrate by microbeta scintillation counting method relative to control CHEMBL4622986
Unchecked IC50 > 100000.0 nM Inhibition of RNA polymerase 2 in human HeLa cell nuclear extract assessed as reduction in RNA transcription by polyacrylamide gel electrophoresis method CHEMBL4622986
Unchecked Activity Substrate activity at human mitochondrial RNA polymerase assessed as nucleotide incorporation into RNA at 100 uM using [33P]-labeled 5'-UUUUGCCGCGCC-3' and 3'-CGGCGCGGCACGTAAGGG-5' RNA/DNA primer/template by polyacrylamide gel electrophoresis method CHEMBL4622986