Compound Info
NAs Base Info
ID Cluster Name Target MolWt
Compound Structure
NAs.004576 0
Target name Tax id
Genome polyprotein 2697049.0
Replicase polyprotein 1ab 2697049.0
DNA-directed RNA polymerase II subunit RPB1 2697049.0
529.458
Chemical Representations
InChI InChI=1S/C22H29FN3O9P/c1-13(2)33-19(29)14(3)25-36(31,35-15-8-6-5-7-9-15)32-12-16-18(28)22(4,23)20(34-16)26-11-10-17(27)24-21(26)30/h5-11,13-14,16,18,20,28H,12H2,1-4H3,(H,25,31)(H,24,27,30)/t14-,16+,18+,20+,22+,36?/m0/s1
InChI Key TTZHDVOVKQGIBA-IAAJYNJHSA-N
SMILES CC(C)OC(=O)[C@H](C)NP(=O)(OC[C@H]1O[C@@H](n2ccc(=O)[nH]c2=O)[C@](C)(F)[C@@H]1O)Oc1ccccc1
Molecular Formula C22H29FN3O9P
Functional Fragments
Base Ribose Phosphate
Base Structure
Match
No Image Available
Match
Calculated Properties
logP 1.657 Computed by RDKit
Heavy Atom Count 36 Computed by RDKit
Ring Count 3 Computed by RDKit
Hydrogen Bond Acceptor Count 10 Computed by RDKit
Hydrogen Bond Donor Count 3 Computed by RDKit
Rotatable Bond Count 10 Computed by RDKit
Topological Polar Surface Area 158.180 Computed by RDKit
Activity Data
Target Activity type Relation Value Unit Assay Source
Hepatitis C virus EC90 = 0.52 uM Antiviral activity against HCV infected in human clone A cells CHEMBL1255219
Hepatitis C virus Inhibition = 25.9 % Antiviral activity against HCV infected in human clone A cells assessed as inhibition of cellular rRNA replication at 50 uM CHEMBL1255219
No relevant target T1/2 = 22.0 hr Half life in simulated gastric fluid at pH 1.2 at 50 ug/mL CHEMBL1255219
No relevant target T1/2 > 24.0 hr Half life in simulated intestinal fluid of pH 7.5 at 50 ug/mL CHEMBL1255219
Plasma T1/2 > 24.0 hr Half life in human plasma at 100 uM CHEMBL1255219
ADMET T1/2 = 0.57 hr Half life in human liver S9 fraction at 100 uM CHEMBL1255219
Rattus norvegicus Cmax = 1934.0 ng/g Cmax in rat liver assessed as 2'-F-2'-C-Methyluridine-5''-TP level at 50 mg/kg, po CHEMBL1255219
Rattus norvegicus Tmax = 4.0 hr Tmax in rat liver assessed as 2'-F-2'-C-Methyluridine-5''-TP level at 50 mg/kg, po CHEMBL1255219
Rattus norvegicus AUC = 16796.0 ng.hr/g AUC (0 to t) in rat liver assessed as 2'-F-2'-C-Methyluridine-5''-TP level at 50 mg/kg, po CHEMBL1255219
Rattus norvegicus AUC = 18080.0 ng.hr/g AUC (0 to infinity) in rat liver assessed as 2'-F-2'-C-Methyluridine-5''-TP level at 50 mg/kg, po CHEMBL1255219
Canis familiaris Cmax = 11670.38 nM Cmax in dog plasma at 50 mg/kg, po qd for 4 days CHEMBL1255219
Canis familiaris Tmax = 0.5 hr Tmax in dog plasma at 50 mg/kg, po qd for 4 days CHEMBL1255219
Canis familiaris AUC = 6903.0 ng.hr.mL-1 AUC (0 to infinity) in dog plasma at 50 mg/kg, po qd for 4 days CHEMBL1255219
Canis familiaris AUC = 6894.0 ng.hr.mL-1 AUC (0 to t) in dog plasma at 50 mg/kg, po qd for 4 days CHEMBL1255219
Canis familiaris Drug uptake = 612.0 ng/g Metabolic stability in dog liver assessed as prodrug level at 50 mg/kg, po CHEMBL1255219
Canis familiaris Drug uptake = 10560.0 ng/g Metabolic stability in dog liver assessed as 2'-F-2'-C-Methyluridine-5''-triphosphate level at 50 mg/kg, po CHEMBL1255219
Cynomolgus monkey Cmax = 62.33 nM Cmax in cynomolgus monkey plasma at 50 mg/kg, po qd for 4 days CHEMBL1255219
Cynomolgus monkey Tmax = 1.0 hr Tmax in cynomolgus monkey plasma at 50 mg/kg, po qd for 4 days CHEMBL1255219
Cynomolgus monkey AUC = 170.0 ng.hr.mL-1 AUC (0 to infinity) in cynomolgus monkey plasma at 50 mg/kg, po qd for 4 days CHEMBL1255219
Cynomolgus monkey AUC = 86.0 ng.hr.mL-1 AUC (0 to t) in cynomolgus monkey plasma at 50 mg/kg, po qd for 4 days CHEMBL1255219
Cynomolgus monkey Drug uptake = 177.0 ng/g Metabolic stability in cynomolgus monkey liver assessed as prodrug level at 50 mg/kg, po CHEMBL1255219
Cynomolgus monkey Drug uptake = 57.0 ng/g Metabolic stability in cynomolgus monkey liver assessed as 2'-F-2'-C-Methyluridine-5''-triphosphate level at 50 mg/kg, po CHEMBL1255219
ADMET permeability = 0.46 nm/s Permeability by PAMPA assay CHEMBL1255219
ADMET Activity Cytotoxicity against HuH7 cells at 100 uM CHEMBL1255219
HepG2 Activity Cytotoxicity against human HepG2 cells at 100 uM CHEMBL1255219
ADMET Activity Cytotoxicity against human BxPC3 cells at 100 uM CHEMBL1255219
CCRF-CEM Activity Cytotoxicity against human CEM cells at 100 uM CHEMBL1255219
ADMET IC50 > 50000.0 nM Cytotoxicity against human erythroid progenitor cells after 14 to 16 hrs CHEMBL1255219
ADMET IC50 > 50000.0 nM Cytotoxicity against human myeloid progenitor cells after 14 to 16 hrs CHEMBL1255219
Rattus norvegicus Activity Toxicity in rat assessed as mortality at 50 to 1800 mg/kg, po after 14 days CHEMBL1255219
Rattus norvegicus Activity Toxicity in rat assessed as change in body weight at 50 to 1800 mg/kg, po after 14 days CHEMBL1255219
Rattus norvegicus Activity Toxicity in rat assessed as change in macroscopic pathology at 50 to 1800 mg/kg, po after 14 days CHEMBL1255219
Rattus norvegicus Activity Toxicity in rat assessed as change in liver weight at 50 to 1800 mg/kg, po after 14 days CHEMBL1255219
Rattus norvegicus Activity Toxicity in rat assessed as change in kidney weight at 50 to 1800 mg/kg, po after 14 days CHEMBL1255219
Hepatitis C virus EC90 = 0.39 uM Antiviral activity against Hepatitis C virus harboring NS5B polymerase S96T/N142T mutant gene infected in human lunet cells by luciferase-based replicon assay CHEMBL1629705
Hepatitis C virus EC90 = 0.45 uM Antiviral activity against Hepatitis C virus harboring wild-type NS5B infected in human HuH7 cells by luciferase-based replicon assay CHEMBL1629705
Hepatitis C virus EC90 = 7.4 uM Antiviral activity against Hepatitis C virus harboring NS5B polymerase S282T mutant gene infected in human HuH7 cells by luciferase-based replicon assay CHEMBL1629705
Hepatitis C virus Selectivity ratio = 16.4 Selectivity ratio of EC90 for Hepatitis C virus harboring NS5B polymerase S282T mutant gene to EC90 for Hepatitis C virus harboring wild-type NS5B polymerase CHEMBL1629705
Hepatitis C virus EC90 = 0.52 uM Antiviral activity against Hepatitis C virus harboring wild-type NS5B infected in human lunet cells by luciferase-based replicon assay CHEMBL1629705
Hepatitis C virus EC90 = 0.39 uM Antiviral activity against Hepatitis C virus harboring NS5B polymerase S96T mutant gene infected in human lunet cells by luciferase-based replicon assay CHEMBL1629705
Hepatitis C virus Selectivity ratio = 0.66 Selectivity ratio of EC90 for Hepatitis C virus harboring NS5B polymerase S96T mutant gene to EC90 for HCV harboring wild type NS5B polymerase CHEMBL1629705
Hepatitis C virus FC = 0.58 Antiviral activity against Hepatitis C virus assessed as log reduction in viral RNA at 0.1 uM after 3 weeks CHEMBL1629705
Hepatitis C virus FC = 4.0 Antiviral activity against Hepatitis C virus assessed as log reduction in viral RNA at 1 uM after 3 weeks CHEMBL1629705
Hepatitis C virus FC > 5.0 Antiviral activity against Hepatitis C virus assessed as log reduction in viral RNA at 2 uM after 3 weeks CHEMBL1629705
Hepatitis C virus Inhibition % Antiviral activity against Hepatitis C virus assessed as inhibition of viral rebound at 1 uM after 3 weeks in presence of G418 CHEMBL1629705
Hepatitis C virus Inhibition % Antiviral activity against Hepatitis C virus assessed as inhibition of viral rebound at 2 uM after 3 weeks in presence of G418 CHEMBL1629705
Hepatitis C virus Activity Antiviral activity against Hepatitis C virus assessed as clearance of HCV from replicon cells at 1 uM CHEMBL1629705
Hepatitis C virus Activity Antiviral activity against Hepatitis C virus assessed as clearance of HCV from replicon cells at 2 uM CHEMBL1629705
DNA-directed RNA polymerase II subunit RPB1 FC = 5.0 Inhibition of human RNA polymerase at 2 uM CHEMBL1629705
Hepatitis C virus EC50 = 1340.0 nM Antiviral activity against Hepatitis C virus Con1 infected in human lunet cells assessed as inhibition of viral RNA replication after 4 days by luciferase reporter gene assay CHEMBL1629705
Hepatitis C virus EC90 = 4.32 uM Antiviral activity against Hepatitis C virus isolate Con1 infected in human HuH-7 cells assessed as inhibition of viral RNA replication after 4 days by luciferase reporter gene assay CHEMBL1629705
Hepatitis C virus EC50 = 90.0 nM Antiviral activity against Hepatitis C virus isolate Con1 harboring Btat protein assessed as viral RNA level by quantitative real-time PCR CHEMBL1629705
Hepatitis C virus EC50 = 93.0 nM Antiviral activity against Hepatitis C virus genotype 1b harboring Ntat protein assessed as viral RNA level by quantitative real-time PCR CHEMBL1629705
Hepatitis C virus EC50 = 430.0 nM Antiviral activity against Hepatitis C virus H77 harboring Htat protein assessed as viral RNA level by quantitative real-time PCR CHEMBL1629705
Hepatitis C virus EC50 = 180.0 nM Antiviral activity against Hepatitis C virus JFH1 assessed as viral RNA level by quantitative real-time PCR CHEMBL1629705
Hepatitis C virus EC50 = 190.0 nM Antiviral activity against Hepatitis C virus H77 CHEMBL1629705
West Nile virus EC50 > 100000.0 nM Antiviral activity against West Nile virus New York by neutral red assay CHEMBL1629705
NON-PROTEIN TARGET EC50 > 100000.0 nM Antiviral activity against Yellow fever virus 17D by neutral red assay CHEMBL1629705
Influenza A virus EC50 > 100000.0 nM Antiviral activity against Influenza A virus (A/Brisbane/59/2007 (H1N1)) infected in HFF by neutral red assay CHEMBL1629705
Influenza A virus EC50 > 100000.0 nM Antiviral activity against Influenza A virus (A/Viet Nam/1203/2004(H5N1)) infected in HFF by neutral red assay CHEMBL1629705
Influenza A virus EC50 > 100000.0 nM Antiviral activity against Influenza A virus (A/Brisbane/10/2007(H3N2)) infected in HFF by neutral red assay CHEMBL1629705
Hepatitis B virus EC50 > 100000.0 nM Antiviral activity against Hepatitis B virus infected in human HepAD38 cells by quantitative real-time PCR CHEMBL1629705
Human immunodeficiency virus EC50 > 100000.0 nM Antiviral activity against HIV infected in human HeLaP4 cells by beta-galactosidase-based reporter gene assay CHEMBL1629705
ADMET CC50 > 100000.0 nM Cytotoxicity against human HuH7 cells assessed as effect on cellular GAPDH RNA level after 8 days by quantitative real-time PCR CHEMBL1629705
HepG2 CC50 > 100000.0 nM Cytotoxicity against human HepG2 cells assessed as effect on cellular GAPDH RNA level after 8 days by quantitative real-time PCR CHEMBL1629705
ADMET CC50 > 100000.0 nM Cytotoxicity against human BxPC3 cells assessed as effect on cellular GAPDH RNA level after 8 days by quantitative real-time PCR CHEMBL1629705
CCRF-CEM CC50 > 100000.0 nM Cytotoxicity against human CEM cells assessed as effect on cellular GAPDH RNA level after 8 days by quantitative real-time PCR CHEMBL1629705
HFF CC50 > 100000.0 nM Cytotoxicity against HFF CHEMBL1629705
ADMET CC50 > 100000.0 nM Cytotoxicity against human HepAD38 cells CHEMBL1629705
ADMET CC50 > 100000.0 nM Cytotoxicity against human HeLaP4 cells CHEMBL1629705
Hepatitis C virus EC90 = 3.81 uM Antiviral activity against Hepatitis C virus Con1 infected in human lunet cells assessed as inhibition of viral RNA replication after 4 days by luciferase reporter gene assay CHEMBL1629705
Hepatitis C virus EC90 = 0.65 uM Antiviral activity against Hepatitis C virus isolate Con1 harboring Btat protein assessed as viral RNA level by quantitative real-time PCR CHEMBL1629705
Hepatitis C virus EC90 = 0.75 uM Antiviral activity against Hepatitis C virus genotype 1b harboring Ntat protein assessed as viral RNA level by quantitative real-time PCR CHEMBL1629705
Hepatitis C virus EC90 = 1.22 uM Antiviral activity against Hepatitis C virus H77 harboring Htat protein assessed as viral RNA level by quantitative real-time PCR CHEMBL1629705
Hepatitis C virus EC90 = 0.52 uM Antiviral activity against Hepatitis C virus JFH1 assessed as viral RNA level by quantitative real-time PCR CHEMBL1629705
Hepatitis C virus EC90 = 0.34 uM Antiviral activity against Hepatitis C virus H77 CHEMBL1629705
HFF CC50 > 100000.0 nM Cytotoxicity against HFF CHEMBL1629705
HFF CC50 > 100000.0 nM Cytotoxicity against HFF CHEMBL1629705
HFF CC50 > 100000.0 nM Cytotoxicity against HFF CHEMBL1629705
HFF CC50 > 100000.0 nM Cytotoxicity against HFF CHEMBL1629705
HepG2 Activity Mitochondrial toxicity in human HepG2 cells assessed as effect on mitochondrial cytochrome c oxidase subunit 2 gene level up to 100 uM after 14 days by real-time PCR assay CHEMBL1629705
CCRF-CEM Activity Mitochondrial toxicity in human CEM cells assessed as effect on mitochondrial cytochrome c oxidase subunit 2 gene level up to 100 uM after 14 days by quantitative real-time PCR assay CHEMBL1629705
HepG2 Activity Cytotoxicity against human HepG2 cells assessed as effect on ribosome RNA gene level at up to 100 uM after 14 days by quantitative real-time PCR assay CHEMBL1629705
CCRF-CEM Activity Cytotoxicity against human CEM cells assessed as effect on ribosome RNA gene level at up to 100 uM after 14 days by quantitative real-time PCR assay CHEMBL1629705
HepG2 CC90 = 12.77 uM Cytotoxicity against human HepG2 cells CHEMBL1629705
CCRF-CEM CC90 = 28.5 uM Cytotoxicity against human CEM cells CHEMBL1629705
HepG2 CC90 < 3.0 uM Cytotoxicity against human HepG2 cells assessed as inhibition of mitochondrial DNA synthesis CHEMBL1629705
CCRF-CEM CC90 < 3.0 uM Cytotoxicity against human CEM cells assessed as inhibition of mitochondrial DNA synthesis CHEMBL1629705
ADMET CC50 > 50000.0 nM Cytotoxicity against human erythroid progenitor cells after 14 to 16 days by colony formation assay CHEMBL1629705
ADMET CC50 > 50000.0 nM Cytotoxicity against human myeloid progenitor cells after 14 to 16 days by colony formation assay CHEMBL1629705
Hepatitis C virus EC50 = 48.0 nM Antiviral activity against HCV subtype 1b by replicon assay CHEMBL3792304
Genome polyprotein Ki = 1500.0 nM Radiolabeled Nucleotide Incorporation Assay: To measure inhibition of the enzymatic activity of the HCV NS5B RNA-dependent RNA polymerase by the nucleoside triphosphate compounds of the present invention, a radiolabeled nucleotide incorporation assay was used. This assay is a modified version of the assay described in International Publication No. WO2002/057287. Briefly, 50 uL reactions containing 20 mM HEPES (pH 7.3); 7.5 mM DTT; 20 units/ml RNasIN; 1 uM each of ATP, GTP, UTP and CTP; 20 uCi/mL [33P]-CTP; 10 mM MgCl; 60 mM NaCl; 100 ug/ml BSA; 0.021 uM DCoH heteropolymer RNA template; and 5 nM NS5B (1b-BKDelta55) enzyme are incubated at room temperature for 1 hour. The assay is then terminated by the addition of 500 mM EDTA (50 uL). The reaction mixture is transferred to a Millipore DE81 filter plate and the incorporation of labeled CTP is determined using Packard TopCount. Compound IC50 values can then be calculated from experiments with 10 serial 3-fold dilutions of the inhibitor in duplicate. CHEMBL3638459
Hepatitis C virus Inhibition % Antiviral activity against HCV J6/JFH/JC-1 infected in human Huh7.5 cells assessed as inhibition of NS3/4A S282T mutant levels at 0.01 to 1 uM treated with fresh media containing compound every 2 days by Western blot method CHEMBL4251597
Hepatitis C virus Inhibition % Antiviral activity against HCV J6/JFH/JC-1 infected in human Huh7.5 cells harboring NS3/4A S282T mutant assessed as inhibition of viral core protein levels at 0.01 to 1 uM treated with fresh media containing compound every 2 days by Western blot method CHEMBL4251597
Hepatitis C virus Inhibition % Antiviral activity against HCV infected in human GS4.3 cells assessed as inhibition of NS3/4A levels at 0.8 uM treated with fresh media containing compound every 2 days measured after 6 days by Western blot method CHEMBL4251597
Hepatitis C virus Inhibition % Antiviral activity against HCV infected in human GS4.3 cells assessed as inhibition of viral core protein levels at 0.8 uM treated with fresh media containing compound every 2 days measured after 6 days by Western blot method CHEMBL4251597
Hepatitis C virus Inhibition % Antiviral activity against 22.5 to 90 IU/cell of HCV J6/JFH/JC-1 infected in human Huh7.5 cells assessed as inhibition of NS3/4A levels at 0.05 uM treated with fresh media containing compound every 2 days by Western blot method CHEMBL4251597
Hepatitis C virus Inhibition % Antiviral activity against 22.5 to 90 IU/cell of HCV J6/JFH/JC-1 infected in human Huh7.5 cells assessed as inhibition of viral core protein levels at 0.05 uM treated with fresh media containing compound every 2 days by Western blot method CHEMBL4251597
Unchecked Ratio CC50/EC50 > 3125.0 Selectivity index, ratio of CC50 for human Huh7.5 cells to EC50 for antiviral activity against HCV genotype 2a JFH/JC1 infected in human Huh7.5 cells CHEMBL4330116
Unchecked CC50 > 200000.0 nM Cytotoxicity against human Huh7.5 cells after 72 hrs by MTT assay CHEMBL4330116
Hepatitis C virus EC50 = 60.0 nM Antiviral activity against HCV genotype 2a JFH/JC1 infected in human Huh7.5 cells assessed as inhibition of viral RNA replication after 72 hrs by qRT-PCR analysis CHEMBL4330116
Hepatitis C virus EC50 = 220.0 nM Antiviral activity against HCV con1 subgenomic replicon infected in human HuH7 cells assessed as reduction in viral RNA replication by qRT-PCR analysis CHEMBL4393666
Huh-7 CC50 > 100000.0 nM Cytotoxicity against human HuH7 cells infected with HCV con1 subgenomic replicon assessed as reduction in cell viability measured after 3 days by CellTiter-blue cell viability assay CHEMBL4393666
Replicase polyprotein 1ab Inhibition = 6.51 % SARS-CoV-2 3CL-Pro protease inhibition percentage at 20µM by FRET kind of response from peptide substrate CHEMBL4495564
SARS-CoV-2 Inhibition = -0.07 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging CHEMBL4495565
SARS-CoV-2 Inhibition = -0.07 % Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging CHEMBL4495565
SARS-CoV-2 IC50 > 20000.0 nM Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging CHEMBL4651402
SARS-CoV-2 IC50 < 19952.62 nM Antiviral activity determined as inhibition of SARS-CoV-2 induced cytotoxicity of VERO-6 cells at 10 uM after 48 hours exposure to 0.01 MOI SARS CoV-2 virus by high content imaging CHEMBL4651402